Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq644 170 3e-37 >seq644 Length=250981 Score = 170 bits (188), Expect = 3e-37 Identities = 365/540 (68%), Gaps = 9/540 (2%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | | ||| ||||||||| |||||||||||||| | | ||| || Sbjct 137869 CTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTT 137928 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| ||||| | | | ||| |||| || ||||| | || Sbjct 137929 CTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAG 137988 Query 159748 CAACCTGTCTGCCACAAATTCGATGTA--GCTACACATCTGCTCACAGTTGATCCCCAGC 159805 | | || || || || || ||||| ||| || | | ||| |||| || || || Sbjct 137989 GAGACGATCAGCGACGAACTCAATGTATTGCTTCA--TGAGGTCAGAGTTCATGCCGAGG 138046 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || | ||| || ||||| | || ||||||| |||||| ||| || || || | Sbjct 138047 AGGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATG 138106 Query 159866 ATCTGCGAGA-CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCA 159924 || | | || || | | | | ||| | || || ||| |||||||| Sbjct 138107 ATATCCTGGATCATCTGCTTGCT--GGCACGACCCT--TGAGGTGAGAGTGGAGGAGGCA 138162 Query 159925 CGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCC 159984 |||||||| ||| || |||||||| |||||||||| ||||||||| | | || || Sbjct 138163 GGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACC 138222 Query 159985 CGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGAT 160044 ||||||| |||||| |||||||| || |||| || || ||||| || || ||||| Sbjct 138223 AGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGAT 138282 Query 160045 CCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGT 160104 ||||| || || ||||| || ||||| | || |||| |||| || | || ||| | Sbjct 138283 ACCCTCAACAGCAGCAAAGGCAACGAGGCGCTGGGCAAAGGAGGAGTCCTTATCCTGGAT 138342 Query 160105 CCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164 ||| | ||||||| |||||||||||| |||||| || ||| ||| | |||||| || Sbjct 138343 CCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 138402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795145548803760