Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq166 221 2e-52 seq23 98.7 1e-15 >seq166 Length=418772 Score = 221 bits (244), Expect = 2e-52 Identities = 432/633 (68%), Gaps = 14/633 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 374435 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCC 374494 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 374495 TCCTCAATGGTGAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 374554 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 374555 TTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 374614 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || |||||| ||| || || || || | ||||| || || ||||| || Sbjct 374615 TTGATGATTCGAAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 374674 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| || || Sbjct 374675 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACAGCGTTGTTGACAGTCTCGCCAAGG 374734 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | || Sbjct 374735 TAAGACTCAGCGGTCTCGCGCATCTTGGTGAGGATCATAGCAGAGATCTCCTC-GGGGCT 374793 Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC--- 7872 | || || || || || || || || || || || ||||| || || |||| Sbjct 374794 GAAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGATGGGCTT----GC--CACCCTT 374847 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | || | ||| | | ||| ||||||||| | || |||| || | ||||| Sbjct 374848 GTCGACGATCTTGAAGGGGAAATGCTTCATATCGGCCTGAACCTCAGCATCGGCGAACTT 374907 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||||| | ||||| || || || || ||||| | |||||||| || ||| || Sbjct 374908 GCGACCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATAGCGACTTGATT 374967 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| || || || || || ||||| || | || || || ||||| | || ||||| Sbjct 374968 CTTGGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGT 375024 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 ||||| || || |||||||| || || || || Sbjct 375025 AGTTCGGTTACCCTGGTCGTTGGCGATGATATC 375057 >seq23 Length=316370 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || ||||| || ||||| || ||| || |||||||| Sbjct 17400 ATCGAAATCCTCACCACCGAGATGGGTATCACCAGCGGTAGCCAGGACCTCGAAGATACC 17341 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | || ||||| || ||||||||||| || || | || | Sbjct 17340 GTCATCAATGGAGAGAAGAGAGACATCGAAGGTACCACCACCGAGATCGTA---GACGAT 17284 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | ||| || | | | |||| || |||||||| |||||||| || || || || | Sbjct 17283 GATC-TGTCGCTCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCT 17225 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | || || ||| ||| || || ||||| | | ||||| || || || |||| Sbjct 17224 CGTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTC 17165 Query 7695 GTTG 7698 | || Sbjct 17164 GCTG 17161 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 17101 CGTTGAAGTAGGCAGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 17042 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 17041 CAGCGACCTCCTTCATCTTGCCAAGAACCATGGCAGAGATCTCCTCAGGAGTGAACTGCT 16982 Query 7824 TC 7825 || Sbjct 16981 TC 16980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125091075640