Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq373 226 3e-54 seq644 122 1e-22 seq74 98.7 1e-15 seq181 91.5 2e-13 >seq373 Length=75118 Score = 226 bits (250), Expect = 3e-54 Identities = 1136/1780 (64%), Gaps = 51/1780 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| |||||| Sbjct 23259 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTC 23200 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 23199 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 23141 Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727 | |||| | |||| ||| |||| | ||||||||| ||| || | || ||| Sbjct 23140 CTTCATGTGGATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 23083 Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 || | || ||| | | ||| ||||| || || ||| ||| ||||| ||| Sbjct 23082 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACATCG 23023 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844 | ||||| | | || || ||||| ||||| | | || ||| || | | |||| Sbjct 23022 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 22966 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 ||| | | |||||| ||||| || | || || |||| || |||||||| | Sbjct 22965 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 22906 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || ||||| | | | ||||| || | |||||||| || ||||| Sbjct 22905 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 22846 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || ||||| |||| || || | ||| ||| || ||||| || || | | ||||||| Sbjct 22845 TCGTTATTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGAAGACTG 22786 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTGAGC 106081 ||||| | || | | ||||| ||||| ||| | |||||||| || | | Sbjct 22785 TTACGGATGCCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCC 22729 Query 106082 TTGGT-TTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTC 106140 || || || |||| |||| ||||| || || | || | || | ||| ||||||| Sbjct 22728 GAGGGCTTGACGTTCC-ACATGTCAAACTGGAGGATACCCTCAGATGCGGGGGAACCCTT 22670 Query 106141 AAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGT 106199 || || |||| ||| | | | ||||| | ||| | || |||| |||| Sbjct 22669 GAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCGT 22611 Query 106200 GATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGT 106259 |||| ||||| || ||||| | || | ||| || || ||| || || | | Sbjct 22610 GATAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGG-GC 22552 Query 106260 AGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318 | ||| | || || |||| || || ||||||||||| | |||||| |||| ||| Sbjct 22551 ATACGCAGAGCAAGGAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATGGGTCGGTGG 22492 Query 106319 CGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378 ||||| ||| || || || || || || || || || |||| ||| Sbjct 22491 CGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTC 22432 Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC 106438 | || |||||| || ||| | || || || | | || | || || Sbjct 22431 AAGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTA---GCAAGCT 22375 Query 106439 TCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 || || | ||| | || || | | || || | ||||| ||||| ||| Sbjct 22374 TCATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCG 22315 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 || | | |||||| | |||||| || || | |||||| || || || || | Sbjct 22314 TCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGG 22255 Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615 ||||||||||| ||||| |||||| |||||||||||||||||| | || | || ||| Sbjct 22254 TTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTC 22195 Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG- 106673 || ||||| | || ||||| || | ||| | | || | | || | |||| ||| Sbjct 22194 TCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATGGTCTTGCG 22139 Query 106674 -CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTC 106731 ||| | |||||| |||||||||| ||| || || || |||||||| || ||| Sbjct 22138 ACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTC 22079 Query 106732 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCG 106791 || ||| || || || || ||||| | || | ||| | ||| || ||||| || Sbjct 22078 GGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACG 22019 Query 106792 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTT 106850 |||||||||||| || || ||||| |||| ||| ||||| | ||| || |||| | Sbjct 22018 CTTCATGAAAAGATCAGGGATCCAAAGGGCGAGAAAAAGATCACGGGCACGGA-CCTCCT 21960 Query 106851 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 106910 | | ||| ||||| || | |||||||| || | || ||| | |||||| ||||| | Sbjct 21959 CCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGA 21900 Query 106911 GATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGG 106967 | |||| || | || || ||| ||| | || | ||||| || || ||| Sbjct 21899 GGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGT 21840 Query 106968 CGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-AT 107025 ||| || || |||||||| |||| || ||||| ||| ||| || || || ||| | Sbjct 21839 TGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGT 21780 Query 107026 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 107085 | ||| | | || | | | || | | | |||||||| |||||| ||| || Sbjct 21779 ATGAG--CCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGA 21722 Query 107086 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 107145 ||| ||||| | | ||||| | ||||| || | || ||| ||||| | | Sbjct 21721 GATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATC 21662 Query 107146 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 107205 | | ||||||| |||| || || || || || ||||||||||| || || | Sbjct 21661 AACCAAGAAGCAAGATGACAATTGAGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGA 21602 Query 107206 TGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 107263 || || ||| | | |||| |||||| | ||||||||||||||| || || Sbjct 21601 AGCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATA 21544 Query 107264 TCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || || || || | | ||||||||| | ||||| Sbjct 21543 TCATCACCCCATATACCAACAGACACACGCATGATCATGT 21504 >seq644 Length=250981 Score = 122 bits (134), Expect = 1e-22 Identities = 332/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| ||| ||||| ||||| ||||| Sbjct 137876 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 137935 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 137936 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 137990 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||| | ||| ||||||||||| |||| ||| Sbjct 137991 GACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 138050 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | |||||| || || || | | ||| Sbjct 138051 CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATAT 138110 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | ||||| | | | ||| | | || | || | || ||| || ||||| Sbjct 138111 CCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAA 138167 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || ||||| || || |||| Sbjct 138168 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCA 138227 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| | || | | ||| | || |||||||||||||| Sbjct 138228 TGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCCT 138287 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456 | ||| ||||| |||| ||||||| ||| |||||| ||| | || | | | |||| Sbjct 138288 CAACAGCAGCAAAGGCAACGAGGCGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 138346 Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479 || ||||| | |||||||| Sbjct 138347 CGGATGGCCCAGTCAGCCTTCTT 138369 >seq74 Length=166489 Score = 98.7 bits (108), Expect = 1e-15 Identities = 224/332 (67%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 9365 TCCCACGGCATCAATCTCATCAATGAAGACAATA-CATGG---TTGATTTTCGCGGGCGA 9420 ||| | |||||||| || || ||||| ||||| || || ||| |||| || | | Sbjct 82177 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCCGCAGT 82118 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 ||||| || || || | ||||| || ||||||||||| ||||| |||| | | Sbjct 82117 G----AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 82063 Query 9481 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 82062 CTACCGGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 82003 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTT 9599 |||||||| ||||| || ||| | |||||| ||||| || | || || ||| Sbjct 82002 GTCTTACCAGTACCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 81943 Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659 | | | | || || | ||| ||||| || |||| |||| | || ||||| || Sbjct 81942 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTTGCT 81883 Query 9660 GCGTCAATCCCCTCAACATCGGTAAACCGGGT 9691 ||||| || | ||||||| | ||||| || Sbjct 81882 TCGTCACAACCATGAACATCGTTGAACCGAGT 81851 >seq181 Length=113960 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||| ||| |||||| ||| | || || | Sbjct 82880 ATGGACGCATTGCCCCTCGATCAGGTCTGGCTTCCAAGCATTTCATTGACACAGGCGCTG 82821 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| ||||||| ||| | |||||||| || || Sbjct 82820 GTGTCATCGATGCCGATTACCGTGGTCAAGTCAAGGTCCTGCTCTTCAACCATAACGAAT 82761 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| |||| || ||||| || |||||||| || |||||| Sbjct 82760 CCGACTTTGAGGTGAAGGAAGGCGACCGCATTGCTCAACTTGTTCTAGAGCGC 82708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973639108040