Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq666 123 3e-23 >seq666 Length=1080035 Score = 123 bits (136), Expect = 3e-23 Identities = 342/516 (66%), Gaps = 15/516 (3%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 749675 ACAGCGATAGGGCCAACACCGGGACCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 749734 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 749735 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 749794 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || || || | || || |||| |||| || || || | | ||| | Sbjct 749795 TTCATGTTGGCGCCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 749854 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 749855 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 749914 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 749915 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 749971 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| Sbjct 749972 GTCTTGCCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 750031 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595 || || || || || || | || || ||||| || |||| |||||| | || || || Sbjct 750032 TTGGTACCGTGAGCAGAAACAGGGATAAGACAGACCTTTCGCTTATCACCATCACGAGCC 750091 Query 138596 TTGATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 | | || || || | ||| || | || || || |||||||||| | || | ||| Sbjct 750092 TCG-TGGTAAGCCTTGATACAGCGA--AGACCAGCGAACTCACCCTGAGCACCAGAGTTG 750148 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || || | | ||| || | ||| ||||| ||| Sbjct 750149 GGCTGAAGAGTGGTAGCGTCCATACCAGTGATCTCA 750184 Score = 100 bits (110), Expect = 3e-16 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | || ||||| | ||||| || || || || || || || |||||||| Sbjct 750826 ACCGTGGTAAACAGCGTAGAAAGCGGACATGTTGGCAAGAAGAGCCTGAGCAGTGCAGAT 750885 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| ||||| || || || | | ||| |||||||| | ||| || || || | | Sbjct 750886 GTTGCTGGTAGCCTTCTCACGACGAATGTGCTGCTCACGAGTCTGGAGAGCCAGGCGAAG 750945 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||||| ||||| | ||| || ||| |||| | ||||| ||||| | ||| Sbjct 750946 AGCAGGTTTGCCGAGACGATCCTTGGAAACACCAACAAGACGTCCAGGAATCTTGCGCTT 751005 Query 139451 ATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || | ||| || ||||| |||||||| ||||| || || || | ||||| ||| Sbjct 751006 GTACTTCTCAGATGTAGCGAAGAAAGCAGCATGGGGACCACCATAGCCGAGAGGAACACC 751065 Query 139511 AAA 139513 || Sbjct 751066 GAA 751068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991372406920