Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq373 192 2e-43 seq644 154 4e-32 seq291 107 6e-18 seq67 102 2e-16 >seq373 Length=75118 Score = 192 bits (212), Expect = 2e-43 Identities = 576/880 (65%), Gaps = 17/880 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | ||| ||| ||| ||||| || || |||||| || | ||||| ||||| Sbjct 22303 GTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 22244 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| || ||||||||||| || ||| ||||| |||| ||||| |||| || Sbjct 22243 GCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 22184 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || || || |||| |||| ||| Sbjct 22183 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATGGTCTTGCGACCCTTGCCCTCCTT 22124 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || |||| || | ||| | | | ||||| ||||| || || || |||||| Sbjct 22123 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 22066 Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924 |||| | ||| || | ||| | ||| | || || | | |||||| ||| || Sbjct 22065 CACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATGAAA 22009 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | |||| ||||| || ||||| || | || |||||| | ||||| Sbjct 22008 AGATCAGGGATCCAAAGGGCGAGAAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGG 21949 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || | ||| || | ||||| || ||||| || || || ||| Sbjct 21948 TTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 21889 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 ||| ||| | |||| |||||||| || |||||||||||||| || ||||||||| Sbjct 21888 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 21829 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| || |||||| || || || ||||| ||| || | || |||| Sbjct 21828 CGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 21769 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220 | |||| | || | || ||| ||||||||||| | |||| || || || || || Sbjct 21768 GCACGAATACGGTGCACATTTAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 21710 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279 ||| | ||||| | | || || |||||| || || | ||| | | ||| ||| Sbjct 21709 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGC 21651 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || |||||||| | || || || || ||||| || || || | ||||| | | Sbjct 21650 AAGATGACAATTGAGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 21591 Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAA 156399 | |||| ||||||| || |||||||||| | ||| | || | || | Sbjct 21590 AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCATA 21531 Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTC 156459 ||| | ||| || | ||| ||| |||||||| ||||| |||||| || ||||| Sbjct 21530 TACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT 21471 Query 156460 GCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || ||||||| || |||| ||| || || || || || Sbjct 21470 TGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 21431 >seq644 Length=250981 Score = 154 bits (170), Expect = 4e-32 Identities = 247/352 (70%), Gaps = 2/352 (1%) Strand=Plus/Minus Query 133307 gAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366 || || ||| ||| || || | ||||| |||||| || || ||||| || || Sbjct 138513 GAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATTCATTCCGAGACCTAC 138454 Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCC 133426 || || || || || |||||||| || ||| |||| | | || ||||||||| Sbjct 138453 TCCCTCCTCATCGACACATACATCAAGGAGCCCGCCCAGCGAACCTATCTCTTCAACGCC 138394 Query 133427 ATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485 ||| | || |||| || || |||||| |||||||||| || |||||||||||| Sbjct 138393 ATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGA 138335 Query 133486 CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt 133545 ||| | ||||| || |||||||| ||||||| || ||||| || || || Sbjct 138334 TAAGGACTCCTCCTTTGCCCAGCGCCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTT 138275 Query 133546 CAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTG 133605 ||||||||| ||| ||| || || ||||| || ||||||||| | | ||||| ||| Sbjct 138274 CAGTGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGAC 138215 Query 133606 TTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 ||| || ||||| || || || | ||||||| |||||||| || |||||| Sbjct 138214 TTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCC 138163 >seq291 Length=417876 Score = 107 bits (118), Expect = 6e-18 Identities = 391/600 (65%), Gaps = 38/600 (6%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 114985 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCTGACACCTCAAACAGACGC 114926 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | ||||||||||||||| ||||| || ||||| Sbjct 114925 TCCTTCAGGAAAGCAGCGGCACCGTGAGCAATCATACAATCACGTTCCATCTCTCCGAAT 114866 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GAT-TAACCATAG 251584 || ||||||||||| ||||| | ||||||| |||| || || || | ||| | | | | Sbjct 114865 CGGAGACCACCATCACGAGCACGACCCTCGACAGGTTGTCGGGTCATGATCTGA--ACTG 114808 Query 251585 GACC----GATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 |||| | ||||| || ||| || | ||||| || |||||||||||| Sbjct 114807 GACCACGAGCACGAGCG----TGAATCTTGTCGTCCACCATGTGACGAAGACGCTGGTAG 114752 Query 251641 AATGCGGGACCGATGAAGA----TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATA 251696 | | || |||| ||| | || || | || || | |||||| || | || || Sbjct 114751 TAGGTAGGTCCGAAGAACACCTGGGCACGGA-GCTTTCG---TCCAGTGTGACCATTGTA 114696 Query 251697 CATAACTTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCAC- 251755 ||| || ||| || ||||| |||||| | ||| ||| |||| | || Sbjct 114695 CATGACCTCGAAACCTCGAGATTGATAACCGTGCTTC-----CTCAGAAGTTCTGAGACT 114641 Query 251756 CAATCTTGAATTTGCTAAAACTG------GTGCCGTCTCCGTAAAGACCCATTTGAATCA 251809 |||| || | || | | || || |||| || | | ||| | | Sbjct 114640 GAATC--GACTGTGACATCAGTGAACGGTGTAGCGTCACCCTCCATACCTTCCAGCGTTG 114583 Query 251810 ACACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCAT 251869 | || |||| | ||| ||| ||| ||||| || ||||| || ||||| || | Sbjct 114582 AAACCTTGCTAAGAAGACACTCAATCAAATGGGCAATTGTCATTCGCGACGGAATGGCGT 114523 Query 251870 GGGGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT 251929 | || ||||||||||| ||||| | || || || |||| |||||||||| | | Sbjct 114522 GAGGGTTGATGATGATATCGGGAGTAAGACCTTCTCGGCTGAAAGGCATATCCTCCT-GT 114464 Query 251930 CAATAATGT--TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | || |||| || || || |||||||| |||||||||||| ||||| |||||||| Sbjct 114463 CGAT-ATGTAACACCGATTGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 114405 >seq67 Length=452285 Score = 102 bits (112), Expect = 2e-16 Identities = 203/296 (69%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||||||||| ||| | || || || || Sbjct 93244 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACTGCA 93303 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 || ||||| ||||| | |||||| |||| || |||||||| | || | || || || Sbjct 93304 GTGTCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAATTC-GCTGGGAGTGAG 93362 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | ||| |||| ||||| ||||| ||||| || || | ||| |||||| Sbjct 93363 ACCACGGAGGTAAGAGTTCTCGACGAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 93422 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || | || | | || | || | || |||||||| || || || | || Sbjct 93423 GAAGTGAGGTAATGTGCGATACTTGAAACCAAAAGGAATACGCTTGCCTTCGACAATTTG 93482 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCC 302864 ||| || | || | |||| || |||||||| || || | ||||||||| || Sbjct 93483 CTGACCGACAAGCGCAGTCATTTGAGAAATATTGATAGATGA--GCCCTTGGAACC 93536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471799289209227