Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27]
971 sequences; 46,623,205 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq121 123 3e-22
seq644 120 4e-21
seq373 109 7e-18
seq298 105 8e-17
>seq121
Length=110875
Score = 123 bits (136), Expect = 3e-22
Identities = 94/111 (85%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
||||||||||||||||||| ||||| || || |||| || ||| | || ||||||||||
Sbjct 76586 CCAACTACCTCGACATCAAACCTCTTCTTGACGTTGGCTGTAAGACCGTTGCCAACATGA 76527
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||| ||||||||||||||||| || || ||||| | | |||
Sbjct 76526 TCAAGGGCAAGTCTCCCGAGGAGATCCGCAAAACTTTCAACATTACGAACG 76476
>seq644
Length=250981
Score = 120 bits (132), Expect = 4e-21
Identities = 201/286 (70%), Gaps = 5/286 (2%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| || | || || |||||||| || |||||
Sbjct 138181 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGAGACCACGCTT 138240
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | ||| || ||| ||||| ||||| || || |||||
Sbjct 138241 CTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCAAA 138300
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358
| | | ||| |||| |||||||| | || | ||| | | |||||| || |||||
Sbjct 138301 GGCAACGAGGCGCTGGGCAAAGGAG--GA-GTCCTTATCCTGGATCCATCGGATGGCCCA 138357
Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTT 869417
||| ||||| || | | | || | || || |||||| ||||| | ||| | |
Sbjct 138358 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATAGGTTC-GCT 138416
Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
||| || ||||||| || |||||||| ||||| || ||||||||
Sbjct 138417 GGGCGGGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTAGGTCTC 138462
Score = 104 bits (114), Expect = 3e-16
Identities = 176/252 (70%), Gaps = 5/252 (2%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| ||| | || ||| |||||| |||||||||||||| | || |||||
Sbjct 137867 GCCTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 137926
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808
|||||| | ||| ||||||| | ||||||| ||| ||| || ||||||
Sbjct 137927 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGA-- 137984
Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868
| || || || || ||||| ||||| ||||| || ||||||| | | |||||||||||
Sbjct 137985 CAAGGAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGA 138044
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
||| || || || | ||| | | ||||| | ||| || |||||| || ||
Sbjct 138045 GGAGGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGA 138104
Query 868929 TGATCTGCCTGG 868940
|||| | |||||
Sbjct 138105 TGATAT-CCTGG 138115
>seq373
Length=75118
Score = 109 bits (120), Expect = 7e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||| || || || |||| ||| ||||| || ||||| || || | || || ||
Sbjct 21862 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGA 21803
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || || | ||| | ||| | || || | |||| | | ||
Sbjct 21802 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACC 21743
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || ||| ||||||||| | || || ||||| || |||||||| |||||
Sbjct 21742 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 21683
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| |||| ||||||| || || | ||||| || || ||| || || | |||||
Sbjct 21682 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGAGGCTGAGGGGTGCC 21623
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
||| ||||||||||||||
Sbjct 21622 GGCATTGAAGAGCGTGGG 21605
>seq298
Length=309150
Score = 105 bits (116), Expect = 8e-17
Identities = 250/377 (66%), Gaps = 22/377 (6%)
Strand=Plus/Plus
Query 18127 TGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAG 18186
|| |||||||| ||| || || || || || | |||||||||||||||||||||
Sbjct 111476 TGTATCATCGATGGCTGCCCTCCCGGCCTGGACCTTACAGAGGCCGACATCCAGCCTCAG 111535
Query 18187 TTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGC 18246
|| | || || ||||| || || || | ||||||| || |||||| || |||
Sbjct 111536 CTGAACCGTCGTCGACCAGGTCAATCGGCCATCACCACGCCTCGTAACGAGAAGGACCGC 111595
Query 18247 GTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGT---------C 18297
|||| ||| | || ||||| ||||| ||| |||| ||||| | || | |
Sbjct 111596 GTCACCATTAACTCTGGCACCGAGAATGGCGTCACTCTCGGAACACCGATTCTATTGACC 111655
Query 18298 GGCCTCTTTGTGGCCAACCGCGACCAGCGGCC--CGTCGACTATTC---CGACATGTGCA 18352
| || | || || | | ||||||| || | || || | | |||||||| |
Sbjct 111656 GTCCCCAATGAGG--ATCAGCGACCAAGGGACTACGGTGATAAGACCATCGACATGTAC- 111712
Query 18353 AGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGT 18412
|| || ||| ||||| |||| || ||| | | |||||||| | ||||| |
Sbjct 111713 -----CCCCGTCCCAGCCACGCAGACTGGACTTACCTCGAAAAGTACGGGGTTAAGGCCT 111767
Query 18413 CGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGG 18472
|||| || || || || ||||| |||||||| | || || ||||| ||||| |
Sbjct 111768 CGTCAGGTGGTGGTCGCAGCTCTGCACGCGAGACTATTGCTCGAGTGGCCGCTGGCGCTG 111827
Query 18473 TCGCCGAGAAATGGCTC 18489
| |||||||| ||||||
Sbjct 111828 TTGCCGAGAAGTGGCTC 111844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107059515192807
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |