Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq121 123 3e-22 seq644 120 4e-21 seq373 109 7e-18 seq298 105 8e-17 >seq121 Length=110875 Score = 123 bits (136), Expect = 3e-22 Identities = 94/111 (85%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 ||||||||||||||||||| ||||| || || |||| || ||| | || |||||||||| Sbjct 76586 CCAACTACCTCGACATCAAACCTCTTCTTGACGTTGGCTGTAAGACCGTTGCCAACATGA 76527 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||| ||||||||||||||||| || || ||||| | | ||| Sbjct 76526 TCAAGGGCAAGTCTCCCGAGGAGATCCGCAAAACTTTCAACATTACGAACG 76476 >seq644 Length=250981 Score = 120 bits (132), Expect = 4e-21 Identities = 201/286 (70%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| || | || || |||||||| || ||||| Sbjct 138181 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGAGACCACGCTT 138240 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | ||| || ||| ||||| ||||| || || ||||| Sbjct 138241 CTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCAAA 138300 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | ||| |||| |||||||| | || | ||| | | |||||| || ||||| Sbjct 138301 GGCAACGAGGCGCTGGGCAAAGGAG--GA-GTCCTTATCCTGGATCCATCGGATGGCCCA 138357 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTT 869417 ||| ||||| || | | | || | || || |||||| ||||| | ||| | | Sbjct 138358 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATAGGTTC-GCT 138416 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| || ||||||| || |||||||| ||||| || |||||||| Sbjct 138417 GGGCGGGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTAGGTCTC 138462 Score = 104 bits (114), Expect = 3e-16 Identities = 176/252 (70%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||| | || ||| |||||| |||||||||||||| | || ||||| Sbjct 137867 GCCTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 137926 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||||| | ||||||| ||| ||| || |||||| Sbjct 137927 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGA-- 137984 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || || || || ||||| ||||| ||||| || ||||||| | | ||||||||||| Sbjct 137985 CAAGGAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGA 138044 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 ||| || || || | ||| | | ||||| | ||| || |||||| || || Sbjct 138045 GGAGGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGA 138104 Query 868929 TGATCTGCCTGG 868940 |||| | ||||| Sbjct 138105 TGATAT-CCTGG 138115 >seq373 Length=75118 Score = 109 bits (120), Expect = 7e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || || || |||| ||| ||||| || ||||| || || | || || || Sbjct 21862 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGA 21803 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || || | ||| | ||| | || || | |||| | | || Sbjct 21802 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACC 21743 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || ||| ||||||||| | || || ||||| || |||||||| ||||| Sbjct 21742 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 21683 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || | ||||| || || ||| || || | ||||| Sbjct 21682 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGAGGCTGAGGGGTGCC 21623 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||| |||||||||||||| Sbjct 21622 GGCATTGAAGAGCGTGGG 21605 >seq298 Length=309150 Score = 105 bits (116), Expect = 8e-17 Identities = 250/377 (66%), Gaps = 22/377 (6%) Strand=Plus/Plus Query 18127 TGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAG 18186 || |||||||| ||| || || || || || | ||||||||||||||||||||| Sbjct 111476 TGTATCATCGATGGCTGCCCTCCCGGCCTGGACCTTACAGAGGCCGACATCCAGCCTCAG 111535 Query 18187 TTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGC 18246 || | || || ||||| || || || | ||||||| || |||||| || ||| Sbjct 111536 CTGAACCGTCGTCGACCAGGTCAATCGGCCATCACCACGCCTCGTAACGAGAAGGACCGC 111595 Query 18247 GTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGT---------C 18297 |||| ||| | || ||||| ||||| ||| |||| ||||| | || | | Sbjct 111596 GTCACCATTAACTCTGGCACCGAGAATGGCGTCACTCTCGGAACACCGATTCTATTGACC 111655 Query 18298 GGCCTCTTTGTGGCCAACCGCGACCAGCGGCC--CGTCGACTATTC---CGACATGTGCA 18352 | || | || || | | ||||||| || | || || | | |||||||| | Sbjct 111656 GTCCCCAATGAGG--ATCAGCGACCAAGGGACTACGGTGATAAGACCATCGACATGTAC- 111712 Query 18353 AGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGT 18412 || || ||| ||||| |||| || ||| | | |||||||| | ||||| | Sbjct 111713 -----CCCCGTCCCAGCCACGCAGACTGGACTTACCTCGAAAAGTACGGGGTTAAGGCCT 111767 Query 18413 CGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGG 18472 |||| || || || || ||||| |||||||| | || || ||||| ||||| | Sbjct 111768 CGTCAGGTGGTGGTCGCAGCTCTGCACGCGAGACTATTGCTCGAGTGGCCGCTGGCGCTG 111827 Query 18473 TCGCCGAGAAATGGCTC 18489 | |||||||| |||||| Sbjct 111828 TTGCCGAGAAGTGGCTC 111844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107059515192807