Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq291 84.2 9e-11 >seq291 Length=417876 Score = 84.2 bits (92), Expect = 9e-11 Identities = 116/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||| || || |||||||| |||||||||||| || || Sbjct 114563 CTCAATCAAATGGGCAATTGTCATTCGCGACGGAATGGCGTGAGGGTTGATGATGATATC 114504 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || | | || | || ||||||||||||| || | | | | ||| || Sbjct 114503 GGGAGTAAGACCTTC---TCGGCTGAAAGGCATATCCTCCTGTCGATATGTAACACCGAT 114447 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 114446 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 114405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951950115608488