Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq49 105 2e-17 >seq49 Length=115138 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| | || || ||| |||||| |||| Sbjct 25262 AAGACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAATCCAGTGACACTATCGACAAC 25203 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || || || || || | ||||||||| Sbjct 25202 GTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAGCAGCGTCTTATCTTC 25143 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | || ||| ||| |||||| ||||||| ||||| Sbjct 25142 GCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAGTCA 25083 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||| ||| | ||||||| Sbjct 25082 ACTCTTCACCTCGTTCTCCGACTTCG 25057 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| ||||||||||| ||||| ||||||| || ||||| ||| || Sbjct 25057 CGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG 25116 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||||||||| || ||||||||||| || || ||| Sbjct 25117 CGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGA 25161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181806097041291