Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq373 230 3e-55 seq644 154 2e-32 seq74 107 2e-18 >seq373 Length=75118 Score = 230 bits (254), Expect = 3e-55 Identities = 1140/1786 (64%), Gaps = 47/1786 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGG--AAGACATTGATTCT 104278 ||| ||| ||||| ||||||| ||| | | ||||| |||||| | || || || Sbjct 21496 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTAT--ATGGGGTGATGATATCGAGCGA 21553 Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336 ||||||||||||||| | |||||| |||| | | ||| || || | || || | Sbjct 21554 GTCTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGC 21611 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 |||||||||| || || || || ||| |||| ||||||| | | | | |||| Sbjct 21612 TCTTCAATGCCGGCACCCCTCAGCCTCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 21671 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 21672 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 21731 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 104515 |||| |||||||| | | | || | | | || | | ||| || ||| || Sbjct 21732 CTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGG 21789 Query 104516 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || Sbjct 21790 TACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 21849 Query 104575 CTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| | || | ||| ||| || || | || |||| || ||||| || Sbjct 21850 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 21909 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | ||| || | || |||||||| | ||| ||||| ||| | ||||||| || Sbjct 21910 GCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 21969 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| ||||| || ||| || ||||| || ||||| ||||||||| | ||||| | Sbjct 21970 TGCCCGTGATCTTTTTCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAA 22029 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| | || | ||||| || || ||||| ||| |||| | || Sbjct 22030 GAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGG 22089 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869 |||||||| || || || ||| |||||||||| ||| ||| | | | | || ||| Sbjct 22090 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-AAGGAGGGCAAGGGTC-GCAAGACC 22147 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | || | | ||| | || ||||| || | || || ||||| || | || Sbjct 22148 ATCAAGGCT-CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 22206 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||||| ||||| || ||||| |||| ||||| || |||||||| | ||| || Sbjct 22207 ATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCAT 22266 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || ||||| || || || ||||| | || | | || ||| ||||| Sbjct 22267 CCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCTGT 22326 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 105108 || ||||| || || | |||| ||| | | || || | || ||| Sbjct 22327 CTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-----CAACTACGATGAAGCTTGC 22381 Query 105109 TTA----TGAAAAA-CTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | | || || || ||| | || | | ||| | ||| | |||| | Sbjct 22382 TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACTTGAACAAGATC 22441 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || ||| || ||||| || || ||||| || ||| ||| | ||||| || Sbjct 22442 ATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCC 22501 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 105282 |||||||| |||||||| || || || |||| ||| || || || || | || || Sbjct 22502 ATTGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTCCTTGCTCTG-CGTATGCCCTTCGA 22560 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || ||| || || |||| || || || |||||||| |||||||| || || Sbjct 22561 GTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCCT 22620 Query 105343 TGAGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || || ||| |||| ||| || ||||| || ||||| ||||||| Sbjct 22621 CACTGCCTCCGTGCAGC--TGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 22678 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 105460 || || || | || | || || ||||| |||||| | | || || | | || Sbjct 22679 CCCGCATCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCGGACCTCTGG 22738 Query 105461 GACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||||| |||| | || | | | ||||| | || | ||||||||||| ||| Sbjct 22739 GACTGGGAGACTCTTCGAG--AGGAAGTCAAGACACACGGCATCCGTAACAGTCTTCTCC 22796 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | ||||| ||||| || ||| ||| | || || |||| ||||| || ||||| || | Sbjct 22797 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAATAACGAGTGCTTCGAGC 22856 Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||||| | || ||||| | | | ||||| || ||||| | |||||||| Sbjct 22857 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACC 22916 Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 || | | ||||| || || ||||| |||||| | | ||||||| | | || Sbjct 22917 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 22976 Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 | | | | |||||||||||| || ||| | || || || | ||| Sbjct 22977 TCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTC 23036 Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 ||||| || || ||||| ||| | | ||| || | ||||| || ||||| | Sbjct 23037 TGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAG 23096 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876 || ||||||||||| |||| ||| |||| || |||| | || |||||| Sbjct 23097 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 23154 Query 105877 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 |||| || | ||||||| | | || | |||||| || ||||| || || ||||| | Sbjct 23155 CAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACCGGCATGTACT 23213 Query 105936 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 |||| || | |||| || || |||||||||| | |||| Sbjct 23214 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 23259 >seq644 Length=250981 Score = 154 bits (170), Expect = 2e-32 Identities = 354/522 (68%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||||||||| ||| | |||||||| |||||| | |||| ||||| | | ||| | Sbjct 138681 TGGACTGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTAACT 138622 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 | |||| || || | ||||||| || ||||| |||| || ||||| || Sbjct 138621 GCTGATGAGCAGTTCTTTGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATC 138562 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || ||||| || | || || ||||| || |||| |||| || | | Sbjct 138561 GTCAACGAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCC-CTGAGGCTCGTTG 138503 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| | | | ||| ||||| ||| |||| Sbjct 138502 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATTCATTCCGAGACCTACTCCCTCCTCA 138444 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 94734 | |||| || || ||||| || || ||| | | ||||| | ||||| | || Sbjct 138443 TCGACACATACATCAAGGAGCCCGCCCAGC-GAACCTATCTCTTCAACGCCATTGAGACC 138385 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 94793 |||| || || | |||||| || || ||||| || ||| | | | || | | | Sbjct 138384 ATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 138325 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 | ||||||| |||| ||| | || ||||| ||||||||||||||||||| |||| | Sbjct 138324 T-CCTTTGCCCAGCGCCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGC 138266 Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 |||| | | || | |||||||||||||| ||||||||||| ||||| |||||||| Sbjct 138265 CTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAA 138206 Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| ||||||||||||||||| || ||| || ||||| Sbjct 138205 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 138164 >seq74 Length=166489 Score = 107 bits (118), Expect = 2e-18 Identities = 228/332 (69%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 9752 ||| | |||||||| || || ||||| || ||| || || ||| |||| || || | Sbjct 82177 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 82120 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | ||||| || || || |||||||| || ||||||||||| ||||| |||| | | Sbjct 82119 GTG--AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 82063 Query 9813 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 82062 CTACCGGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 82003 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 9931 |||||||| ||||| || ||| | |||||| |||| || | || || ||| Sbjct 82002 GTCTTACCAGTACCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 81943 Query 9932 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCG 9991 | | | | || || | ||| ||||| || |||| ||||| | || ||||| || Sbjct 81942 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTTGCT 81883 Query 9992 GCGTCAATCCCCTCAACATCGGTAAACCGGGT 10023 ||||| || | ||||||| | ||||| || Sbjct 81882 TCGTCACAACCATGAACATCGTTGAACCGAGT 81851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253720672040