Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq373 228 9e-55 seq644 120 3e-22 seq140 107 2e-18 >seq373 Length=75118 Score = 228 bits (252), Expect = 9e-55 Identities = 469/688 (68%), Gaps = 22/688 (3%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||| ||| ||||| || | || || || ||||| || || || ||| ||||| || Sbjct 21584 AAGTTCTTCACGCATGCTTCCCCCACGCTCTTCAATGCCGGCACCCCTCAGCCTCAATTG 21643 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || |||||| |||| | |||||||| ||| || || || |||||||| || ||| Sbjct 21644 TCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTC 21703 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTC-GAACG 53444 ||| |||||| ||||||||| | | |||||||| ||| | | ||| | | | Sbjct 21704 AAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTAAATGTGCACCGTA-- 21761 Query 53445 TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCC 53502 | ||||| | ||| || ||| || || ||||| | ||| |||| | || || Sbjct 21762 TTCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCGA--ATGGTGTTGTTCC 21819 Query 53503 TATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAA 53562 |||||| || |||||||||||||| || ||||| ||| |||||||||| ||||| Sbjct 21820 TATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACC 21879 Query 53563 GGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCT 53622 || | || ||||||||||||||||| |||||| | || | | || || || || || Sbjct 21880 CGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGATGTCTTCGATTTCCTTGATCT 21939 Query 53623 GCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGAT 53682 ||| ||| || ||| | || ||| | || |||||| || ||| || || ||||| Sbjct 21940 CCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGATCTTTTTCTCGCCCTTTGGAT 21999 Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAA 53742 || || || |||||| | || || ||| ||| || ||| |||||||| || || Sbjct 22000 CCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGTGACTGGACACTGATGTGTCCCAA 22059 Query 53743 CGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801 ||||||||| |||||| | | || |||||| |||||||| | | |||| | || Sbjct 22060 CGAGTGCCCTGGCCTCGCCGACTG-CTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGT 22118 Query 53802 AC-----GCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATG 53855 || | || | |||| ||| |||| ||||||| | || | ||| | | Sbjct 22119 ACGAGAAGGAGGGCAAGGGTCGC------AAGACCATCAAGGCTCAGAAGCTTTGGTACG 22172 Query 53856 CAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCA 53915 | || || || |||| ||||| |||| || | |||| |||||||||| | || Sbjct 22173 CCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATTCATGCTCTACAAGGATGCCTGCA 22232 Query 53916 ACGAGAAGAGCAACCAGAAGAACATCGG 53943 || ||||||||||| |||||| |||| Sbjct 22233 ACCGCAAGAGCAACCAAAAGAACCTCGG 22260 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||| ||||| | ||| || ||||||||||| ||||||||| |||| || | || Sbjct 23086 TGCTGATCGAGGTGCCTTCATTGATCAGTCCCAGTCACTGAACATCCACATGAAGGACCC 23145 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | ||| |||| | | | ||||||||| || |||||| || |||||||| || Sbjct 23146 CACGATGGGCAAGATCACCAGTATGCACTTTGCAGGCTGGAAGCTTGGCCTCAAGACCGG 23205 Query 55906 TATGTACTATCTGCGGAC 55923 |||||||| || || || Sbjct 23206 CATGTACTACCTTCGTAC 23223 >seq644 Length=250981 Score = 120 bits (132), Expect = 3e-22 Identities = 317/474 (67%), Gaps = 20/474 (4%) Strand=Plus/Plus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || |||||||| || ||||||||||| | ||| ||||||| ||||| |||||||||| Sbjct 138218 AGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAG 138277 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924 ||||| || || ||| |||||||| || ||||| || || || | | || | | Sbjct 138278 AAGATACCCTCAACAGCAGCAAAGGCAACGAGGCGCTGGGCAAAGGAGGAGTCCTTATCC 138337 Query 74925 ---ATCCAAGTCTGA--GCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATC 74978 ||||| || || ||||| ||||| ||| || | |||||| | || || || Sbjct 138338 TGGATCCA--TCGGATGGCCCAGTCAGC-CTTCTTTCGGATGCAGGGAATGGTCTCAATG 138394 Query 74979 GCTTGGAAGAGGCTTGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTG 75036 || | |||||| | ||| || |||| ||||||| | |||| || | || | Sbjct 138395 GCGTTGAAGAG--ATAGGTTCGCTGGGCGGGCTCCTTGATGTATGTGTCGATGAGGAGGG 138452 Query 75037 AGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCT 75096 |||| ||||| |||||||| ||| | | |||| | ||||||| | || |||| Sbjct 138453 AGTAGGTCTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCT 138512 Query 75097 CTGCAATCTGTACAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTC 75154 | | ||||| || | || |||| || | ||| ||||| ||||||| || || Sbjct 138513 CAGGGATCTGGACCTCGCCACTGAATCGCTC--GACGAGGTTCTCGTTGACGATACCATC 138570 Query 75155 CGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGT---GAG 75211 ||||| ||||| ||||| || | || |||| ||||||| |||| | | Sbjct 138571 AGAGGCAGCGAAGAAAGCAAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCG 138630 Query 75212 TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 |||| ||| || | || ||| | | |||||||||||| | |||||||| Sbjct 138631 GTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAA 138684 >seq140 Length=258955 Score = 107 bits (118), Expect = 2e-18 Identities = 270/405 (67%), Gaps = 8/405 (2%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || ||||| ||||| || |||||||||||||||| ||| || | || || ||||| | | Sbjct 89307 CCTGTACCAATGCCATCGGCACCGTTGACCAGAACCATGGGGAGGATTGGAGCGTATACC 89366 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTG-TCAGCC-- 151992 ||||| | | | ||||| || || | | | || | || | | ||| || Sbjct 89367 ATTGGCTCGATTTTCTTGCCGTCTTC-ATAATGA--TGCATCA-GGTTTGGCTCATCCAT 89422 Query 151993 -GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGC 152051 || | ||| ||| || | | ||| || ||| |||||| |||| || | ||||| Sbjct 89423 GGGGTGGAAGATCTTGCGGGCGAATGGAGACAGACGAGTGAAGGTGTAACGAGGACTGGC 89482 Query 152052 CGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111 ||||| ||||| || || || | || || | |||| ||| || || ||||| Sbjct 89483 AGCATCAGATCCACCGGCAAGTCGAGAACCGAAGTTTCCACTGGGTTCCAGACAGTTGAT 89542 Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTC 152171 |||||| | ||| ||||| ||||| |||| | || || || ||| | ||| Sbjct 89543 GTTGTTTGAGCCGACGAAGTTCTGGGCCAGGCCGATGATAGTCTGTTGAAGAGACTGTTC 89602 Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231 ||||||||| || || |||||||| | || || || ||||| | | |||||| |||| Sbjct 89603 ACCGTGGTGGTAGGCAGTCTGCTCAGAGACATAACCAGCCAATTCAACGACCTTCTTGTC 89662 Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276 | | ||| |||||| |||||| || || ||||| ||||| Sbjct 89663 TTTGACGATGTTTCTCTTGAAACAGGCATATATGACCTTACGCTG 89707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209358165800