Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq373 183 4e-41 >seq373 Length=75118 Score = 183 bits (202), Expect = 4e-41 Identities = 438/656 (67%), Gaps = 16/656 (2%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || || || ||||||| || ||||||||| | | | ||| || ||||| Sbjct 22071 CCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATG 22012 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| ||||| || || | ||| ||||| |||| | || || || || Sbjct 22011 AAAAGATCAGGGATCCAAAGGGCGAGAAAAAGATCACGGGCACGGACCTCCTCCTTACCG 21952 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| ||||| || || || | | |||||| ||||| || || || || || Sbjct 21951 TGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 21892 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | | || ||||| || || || ||||| || | ||| | || ||||| || | Sbjct 21891 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 21832 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || ||| || ||||| || || || || | || || ||| Sbjct 21831 ACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 21772 Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || |||||| | | || | | || || || || |||||||| || || | | Sbjct 21771 GTAGCACGAATACGGTGCACATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGG 21714 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAG-AAGA 78371 | || || | ||||||||||| ||||| |||||||| ||| |||| | || |||| Sbjct 21713 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA 21654 Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431 | || | |||| |||| | ||| || || ||||| || | || || || |||||| Sbjct 21653 AGCAAGAT-GACAATTGAGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 21595 Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC----AATAGCT-GATTCTATGTCCC 78486 || || | || ||| | ||||||||||| || | | ||| ||| || ||| Sbjct 21594 GTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCC 21535 Query 78487 ATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTAT 78546 | || || || | |||||||| | ||| |||||||| | || || ||||| Sbjct 21534 CAT-----ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTAC 21480 Query 78547 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602 | || || | | ||||||| |||||||| || || ||||| || | |||| Sbjct 21479 CGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 21424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660368457440