Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq39 212 7e-50 >seq39 Length=4506647 Score = 212 bits (234), Expect = 7e-50 Identities = 625/956 (65%), Gaps = 12/956 (1%) Strand=Plus/Plus Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769 ||| || || || || || || ||||| | || | | || | || || |||||||| Sbjct 1598317 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCA 1598376 Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829 ||| || | |||||| || | || | ||| |||||||| ||| || ||||| Sbjct 1598377 AAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATC 1598436 Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889 ||| || || |||||||| | || || ||| |||||| || | ||| || | ||| | Sbjct 1598437 CTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAG 1598496 Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAA 53946 ||||||| || | ||| | ||| | ||| ||||| | |||| Sbjct 1598497 CTTTTGAGCCTTGATGGTC---TTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAG 1598553 Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006 || ||||| ||||| | | | | | ||||| || || | |||||||||| Sbjct 1598554 AGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAG 1598613 Query 54007 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 54066 | ||| || |||| | | || || ||||| || |||||||| |||||||| || | Sbjct 1598614 TGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAG 1598673 Query 54067 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 54126 || ||||| | || | ||||| || || ||||| ||||| ||||| | Sbjct 1598674 GAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATC 1598733 Query 54127 CATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCC 54186 | | |||||| ||||| || || | ||| |||| | | | || || || ||||| || Sbjct 1598734 GAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCC 1598793 Query 54187 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 54246 ||||| || | || | ||| ||||| || | || | | ||| |||| || |||||| Sbjct 1598794 ACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATT 1598853 Query 54247 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGAT 54304 |||| ||| ||||| |||| ||| || ||| | ||||||||| | | ||| | Sbjct 1598854 CGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATT--T 1598911 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 ||||| || || || ||||| || ||||| | || || || | ||||| ||||| Sbjct 1598912 AGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATT 1598971 Query 54365 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 54424 ||||| ||||| || ||| |||| | | | || || |||| |||| | || Sbjct 1598972 CCCTCAATACTGTCGTCCTTCATATCCACCAAGAAGCAAGATGACAATTGGGGCTGAGGG 1599031 Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484 || || ||||| || | || || ||||| ||||| || | || ||| | |||||| Sbjct 1599032 GTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATGAGATTG 1599091 Query 54485 TACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 54543 || ||||| | || || ||||| || || | || || | |||||||| | Sbjct 1599092 TATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGAT 1599150 Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603 |||||||||||| | || || ||||| || || || || | ||| ||| ||||| Sbjct 1599151 CATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTAAGGAGGTATGATCGCTCCAA 1599210 Query 54604 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659 ||| || || ||||| || | |||| || || || || |||| ||| | |||| Sbjct 1599211 AGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAAACAATGGCAGAGT 1599266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721280874640