Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq40 89.7 4e-13 >seq40 Length=4096408 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| || || | |||||| ||||| || || || |||||||||||| | Sbjct 1050801 CCGCCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTC 1050860 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||||| || || || ||| ||||||| | || ||||| || Sbjct 1050861 AAGGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGAGGG 1050920 Query 18219 ACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || ||| ||| | ||| || | | | |||||||| || ||| Sbjct 1050921 ATACCCTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATAGTGTCACTGGATTCGAC 1050979 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| | || || || | ||| || || ||||| ||||| Sbjct 1050980 CTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTCACGAAAATCTGCAT 1051027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343801200035