Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 >seq3 Length=2226179 Score = 100 bits (110), Expect = 2e-16 Identities = 280/426 (66%), Gaps = 14/426 (3%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | |||||||| |||||||| || || | ||| ||| | || || | || Sbjct 1539046 CGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGCCTTCGCCTCTATC 1539105 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || || | || ||||||||| | || Sbjct 1539106 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCT 1539165 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCA-AACAA 22919 |||||||||||||| ||| ||||||||| || | || | | | || ||| Sbjct 1539166 CGTGACGAAGGTCTTCACACTGACTTTGCCTGCCTCCT-------CCACTCTCACCTCAA 1539218 Query 22920 --ACCGTGTCAG---GACGATG-CACATCAAATCATATCTGATGCCGTTGACATTGAGAC 22973 |||| ||| | |||| || | ||||| ||||||||| ||||||| Sbjct 1539219 GGGTCGTGCCAGTAAGCAGATGATCCAGGATATCATCATTGATGCCGTCACCATTGAGCA 1539278 Query 22974 GGCTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAG 23033 || ||| || || || || |||| || || ||||| |||| |||| Sbjct 1539279 GGAGTTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAA 1539338 Query 23034 ACTGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTA 23093 | |||||| |||| || || ||||| || || | || || || ||| ||| | || Sbjct 1539339 GCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAATGAGAAGGTCTA 1539398 Query 23094 TAACGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTT 23153 || | |||| || || || |||||||| ||||| | ||| || || || ||||| Sbjct 1539399 CAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTT 1539458 Query 23154 CTTTGA 23159 ||| || Sbjct 1539459 CTTCGA 1539464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233413311329