Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq40 91.5 1e-13 >seq3 Length=2226179 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||||||| |||| || |||||||| || ||| Sbjct 467575 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 467516 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || || ||||| ||||| || || || || ||||| ||| || || Sbjct 467515 GCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 467456 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | ||||||||||| ||| | |||||| || || | || Sbjct 467455 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 467396 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 467395 TTGACGAAAATCTGCAT 467379 >seq40 Length=4096408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || ||||| || |||||||| ||||| | |||| ||| || ||||| Sbjct 1051566 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 1051625 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || | |||| |||||||| ||||| || ||||| || ||||| ||| | || Sbjct 1051626 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC-TGAATCTT 1051684 Query 139682 TGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | || | | || | ||||||| | ||| ||||| | ||| | ||||||||||| Sbjct 1051685 GGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 1051744 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 ||| || || ||||| || ||||| Sbjct 1051745 CAAGGTCTTGACGAAGATCTGCAT 1051768 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||| || ||||||||||| || ||| | || | |||||| || || Sbjct 1051281 TGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCAAGTTGC 1051340 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| ||||||| || ||||| || ||||| ||||| || ||||| ||| | || Sbjct 1051341 TTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC-CTGAATCTT 1051399 Query 139682 TGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | ||| | | || | || |||| | ||| ||||||| ||| | |||||||| || Sbjct 1051400 CGACTTAACATTGTCGATGGTATCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 1051459 Query 139741 CAACGTTTTTACGAATAT 139758 | || || |||| ||| Sbjct 1051460 GAGGGTCTTGACGACTAT 1051477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063733365600