Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 242 5e-59 seq39 134 2e-26 >seq3 Length=2226179 Score = 242 bits (268), Expect = 5e-59 Identities = 576/856 (67%), Gaps = 32/856 (4%) Strand=Plus/Plus Query 125011 ATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGG 125070 ||||| | |||||| |||||||||| |||||| |||| ||||| ||||| | || ||| Sbjct 1538634 ATCAT-AGATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGA 1538692 Query 125071 TCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGT 125130 | ||||| |||||||| || |||| ||| | | || | |||| ||||| | Sbjct 1538693 TTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTAACTGCTGATGAGCAGTTCT 1538752 Query 125131 TTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-G 125189 || | || ||||| | || ||||| || | ||| ||||| ||||||||||| || || | Sbjct 1538753 TTGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCG 1538812 Query 125190 TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCA 125248 | || |||||| | ||| | || || |||| |||| |||| ||||| ||||| Sbjct 1538813 TCGAG-CGATTCAGTGGCGAGGTCCAGATCCCTGAGGC-TCGTTGCTTCTACGGCTTCCA 1538870 Query 125249 AATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCG 125308 |||||||| |||||| | || || || | ||||| || || |||| ||||| Sbjct 1538871 GATCATGATGGAGAACATTCATTCCGAGACCTACTCCCTCCTCATCGACACATACATCAA 1538930 Query 125309 CGATCC-GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTA 125367 || || || | ||| || ||||| ||||| || || || | || | || || | Sbjct 1538931 AGAGCCCGCCCAGCGAACCTAT-CTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAA 1538989 Query 125368 AAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGAC 125427 | |||||| | |||| || || |||||| | || | | || || | ||| | | | Sbjct 1538990 AGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTC 1539049 Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 | || || || || || || ||||| ||||||||| ||| || || | ||||| | Sbjct 1539050 TCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGCCTTCGCCTCTATCTTCT 1539109 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAG 125547 ||||||||||||| || |||||||| || ||||| | |||||| | || ||||| | Sbjct 1539110 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTG 1539169 Query 125548 ACGAGGGCCTACACTGTGACTTTGC---CATTCTACTGTTTCGCAACTATCTGCGTCCCG 125604 |||| || || ||| ||||||||| | | || | | || | | | ||| || Sbjct 1539170 ACGAAGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTCAAGGGTCGTGCC- 1539228 Query 125605 AGT--GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 ||| |||||| ||| ||| |||| |||| |||||||| | || || Sbjct 1539229 AGTAAGCAGAT-----GAT--CCAGGATATCATCATT------GATGCCGTCACCATTGA 1539275 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| || |||||| | || || | | | |||||||||| | || || Sbjct 1539276 GCAGGAGTTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCAT 1539335 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC---CGCAA 125779 | ||||||| ||||| || || |||||||| || || ||||| || Sbjct 1539336 GAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCG---CTCTTGGCAATGAGAA 1539392 Query 125780 GATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 | | ||||| |||| || ||||| || |||||| | ||| || || | || ||||| Sbjct 1539393 GGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGAC 1539452 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 1539453 CAACTTCTTCGAGAAG 1539468 >seq39 Length=4506647 Score = 134 bits (148), Expect = 2e-26 Identities = 310/463 (67%), Gaps = 8/463 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | || Sbjct 1598799 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGAT 1598740 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || |||| || ||| | || Sbjct 1598739 GTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGAT 1598680 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052 | || ||| || ||| | || ||| | ||||||||||| || || |||||| Sbjct 1598679 CTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGTG-- 1598622 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || ||||| ||| || || || || || |||| |||| || || ||| Sbjct 1598621 -ACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAG 1598563 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGC 97171 || ||||| |||| |||||| | |||||| | || |||| | || | || Sbjct 1598562 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACCA-TCAAGGC 1598504 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | | || ||| | ||||| | ||| ||| ||||| |||| || | ||| || Sbjct 1598503 TCAAAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAACCCATTCATGCT 1598444 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||||| || || ||||| || |||||| || | || |||||| |||| Sbjct 1598443 CTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCATCCGAAGCTC 1598384 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||| || ||||| |||||| | |||||| |||| |||||| Sbjct 1598383 CAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAG 1598341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058801680680