Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq39 381 2e-100 >seq39 Length=4506647 Score = 381 bits (422), Expect = 2e-100 Identities = 1121/1701 (66%), Gaps = 50/1701 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| ||| ||||| | || | ||| | ||||| || ||||| ||| Sbjct 1599216 AAGACTTTGGAGCGATCATACCTCCTTAAGATTGACGGTAAGATTGTCGAGCGCCCTCAG 1599157 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT- 363516 || ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 1599156 CACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGTC 1599103 Query 363517 ---GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAAT 363569 || ||||| || || |||| || || | |||||||| || | || || | Sbjct 1599102 TTGGAGACATACAATCTCATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGCT 1599047 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | |||||| || || | | | || || |||| |||||||| | | | |||||||| Sbjct 1599046 CTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTGGATATGAAGGA 1598987 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 ||| || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 1598986 CGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 1598927 Query 363690 AGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCA 363748 || || |||||| || | ||| | ||||||| || | | ||||| ||| | Sbjct 1598926 TGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGTA 1598868 Query 363749 CAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807 | || ||| |||||||| | ||||| ||||||||||| || |||| ||||| || Sbjct 1598867 CCAACGG-TACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGG 1598809 Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867 || |||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct 1598808 TATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 1598749 Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927 || | ||| | || || || ||||| ||||| || ||| || || ||||| | ||| Sbjct 1598748 CACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGT 1598689 Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA 363987 || |||||||| ||| ||| |||||| | |||| | ||| |||||||| || || | Sbjct 1598688 GCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--AA 1598631 Query 363988 GGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 | | | | ||| |||| | || || |||| || || || || |||| | | Sbjct 1598630 AGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACG 1598571 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | || || | | ||||| ||||||||||| || |||||| |||| ||| ||||| | Sbjct 1598570 GAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACCA 1598511 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | || || ||||| |||| ||||| | || | |||| |||||| |||| || | Sbjct 1598510 TCAAGGCTCAAAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAACCCAT 1598451 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 ||| | ||||| ||| | |||||||||||| ||||| || |||| ||||| | || Sbjct 1598450 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCA-TC 1598392 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 | || |||||| || || || ||||| || ||| ||||| |||||| || || Sbjct 1598391 CGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCTGTC 1598332 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGAC 364338 || |||||||| || | | || || | || | | | |||| || | ||| Sbjct 1598331 TGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTACGAC 1598272 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | || | | | | || | | || || | |||| || ||||| | ||||| Sbjct 1598271 TTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGAT 1598212 Query 364399 AAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTGG 364457 ||| | || || ||| | || | || ||| ||||| || || || ||||| Sbjct 1598211 GTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTGG 1598153 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTCG 364515 ||||||||| || ||||| || || | |||| | ||||| ||| | || || || Sbjct 1598152 TCTTGGTGTTCAAGGCCTTGCCGATGCTTTTCT--TGCTCTGCGTATGCCCTTCGAGTCA 1598095 Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575 || || ||||||| || || ||| |||||||||| || || ||| || || | ||| Sbjct 1598094 CCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATCACGCTGCCCTCACT 1598035 Query 364576 G-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 | || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 1598034 GCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCGC 1597976 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || |||| | | |||||||| | ||||| |||| ||| || | || ||| | || Sbjct 1597975 ATCTGAGGGTATCCTGCAGTTTGACATGTGGAACGTCAAGCCCTCGGACCTCTGGGATTG 1597916 Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAGC 364751 ||| || || || | || |||| || || | || ||| || ||| || || Sbjct 1597915 GGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT---GC 1597859 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 1597858 TCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTA 1597799 Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || |||| | || |||||| ||||| | || || || | ||| || ||| | Sbjct 1597798 CACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAATCCCTG 1597739 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 || ||||||| ||| |||| || |||||| || ||||||||| ||||| Sbjct 1597738 GCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCAT 1597679 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 || | |||||||| | ||||||||||| | || | || | ||| || | || Sbjct 1597678 TGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGCTCTGTA 1597619 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 ||| || || ||||| || || ||| || || | ||||| || ||||| ||||| Sbjct 1597618 CAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAGGTGC 1597559 Query 365052 TTTTATCTGTCAGAGCCAGTC 365072 || || |||| |||||| Sbjct 1597558 CTTCATTGATCAGTCCCAGTC 1597538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352881933626