Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq39 215 7e-51 >seq39 Length=4506647 Score = 215 bits (238), Expect = 7e-51 Identities = 626/956 (65%), Gaps = 12/956 (1%) Strand=Plus/Plus Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811 ||| || || || || || || ||||| | || | | || | || || |||||||| Sbjct 1598317 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCA 1598376 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 ||| || | |||||| || | || | ||| |||||||| ||| || ||||| Sbjct 1598377 AAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATC 1598436 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931 ||| || || |||||||| | || || ||| |||| | || | ||| || | ||| | Sbjct 1598437 CTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAG 1598496 Query 62932 GACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAA 62988 | ||||||| || | ||| | ||| | ||| ||||| | |||| Sbjct 1598497 CTTTTGAGCCTTGATGGTC---TTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAG 1598553 Query 62989 TCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAA 63048 |||||||| ||||| | | | | || ||||| || || | |||||||||| Sbjct 1598554 AGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAG 1598613 Query 63049 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63108 | ||| || |||| | | || || ||||| || |||||||| |||||||| || | Sbjct 1598614 TGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAG 1598673 Query 63109 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63168 || ||||| | || | ||||| || || ||||| ||||| ||||| | Sbjct 1598674 GAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATC 1598733 Query 63169 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63228 | | |||||| ||||| || || | ||| ||||| | | | || || || ||||| || Sbjct 1598734 GAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCC 1598793 Query 63229 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 63288 ||||| || | || | ||| ||||| || | || | | ||| |||| || |||||| Sbjct 1598794 ACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATT 1598853 Query 63289 GGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGAT 63346 |||||||| ||||| || | ||| || ||| | ||||||||| | | ||| | Sbjct 1598854 CGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATT--T 1598911 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 ||||| || || || ||||| || ||||| | || || || | ||||| ||||| Sbjct 1598912 AGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATT 1598971 Query 63407 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63466 ||||| ||||| || ||| |||| | | | || || |||| |||| | || Sbjct 1598972 CCCTCAATACTGTCGTCCTTCATATCCACCAAGAAGCAAGATGACAATTGGGGCTGAGGG 1599031 Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || ||||| || | || || ||||| || || || | || ||| | |||||| Sbjct 1599032 GTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATGAGATTG 1599091 Query 63527 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63585 || ||||| | || || ||||| || || | || || | |||||||| | Sbjct 1599092 TATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGAT 1599150 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 |||||||||||| | || || ||||| || || || | | ||| ||| ||||| Sbjct 1599151 CATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTAAGGAGGTATGATCGCTCCAA 1599210 Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701 ||| || || ||||| || | |||| || || || || |||| ||| | |||| Sbjct 1599211 AGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAAACAATGGCAGAGT 1599266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631659422800