Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 183 3e-41 >seq3 Length=2226179 Score = 183 bits (202), Expect = 3e-41 Identities = 379/559 (68%), Gaps = 5/559 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||||||||| || || || | ||| ||| ||| || | Sbjct 1539198 GCAGGCAAAGTCAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAG 1539139 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || || || || |||| ||| || Sbjct 1539138 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAA 1539079 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || ||||| || || | ||| | |||||| | | ||| | || Sbjct 1539078 GATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTA-TCCT 1539020 Query 93271 -GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 ||||||| | ||||| || || || || || || || | || || || |||| Sbjct 1539019 GGATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 1538960 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || || || ||||| | | | ||| |||||||| ||||| | || || || Sbjct 1538959 TGAAGAGATAGGTTCGCTGGGCGGGCTCTTTGATGTATGTGTCGATGAGGAGGGAGTAGG 1538900 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || ||||| | |||||||| || ||||| |||||||| || | ||| || | || Sbjct 1538899 TCTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGA 1538840 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| || || | |||| ||| ||||| || || ||||| |||||||| || || | Sbjct 1538839 TCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAG 1538780 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGC--TTATCCC 93566 | || ||||| | || || | ||| | ||||||| | ||| || || | || Sbjct 1538779 CGAAGAAAGCAAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCC 1538720 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| ||||| || || ||||| | || || ||||||| || || || || || | Sbjct 1538719 AGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCT 1538660 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 1538659 TCTTGTACATTTGCCAAAT 1538641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860500687320