Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq39 196 6e-45 seq3 147 3e-30 >seq39 Length=4506647 Score = 196 bits (216), Expect = 6e-45 Identities = 1092/1723 (63%), Gaps = 51/1723 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 1597407 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 1597466 Query 113625 CCTGCTTCCAGGCATACATA-TGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 | | |||||| | | || | ||||| || | |||| | || || | |||| Sbjct 1597467 CAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 1597525 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| ||||| ||||| |||||| || ||||| || ||||| | || Sbjct 1597526 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 1597585 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || | | ||| ||||| ||||| |||| || ||| | || | ||||| Sbjct 1597586 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCGGCAGGGATG 1597645 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 1597646 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 1597705 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 113923 || ||||| || | || |||| | || ||||||||| |||||||| Sbjct 1597706 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGATTGACAACCTGGAACTCACCA 1597765 Query 113924 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 113983 ||||| || | | |||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 1597766 GCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 1597825 Query 113984 AAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 114043 | || |||| ||| ||| || ||||| || || | ||| || |||||||||| || Sbjct 1597826 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCG 1597885 Query 114044 TTTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | | | | | | | || || | | ||||| || || | | | || | | Sbjct 1597886 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAATCCCAGAGGTCCGAGGGCTTGACGT 1597943 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 |||||| |||||||| |||||||| | || || || || |||| || || ||| | Sbjct 1597944 TCCACATGTCAAACTGCAGGATACCCTCAGATGCGGGGGAACCCTTGAAGGTGGAGTAGG 1598003 Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218 | ||||| ||| |||| | ||||| || |||||| |||||||| || |||| Sbjct 1598004 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCT 1598060 Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 114277 |||| || | || | | |||||| || || || | | || || | | Sbjct 1598061 CAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCA 1598119 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | ||| |||| || || ||||| ||||| || ||||| || || || | ||| ||| Sbjct 1598120 AGAAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 1598179 Query 114338 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 || ||||| || || || || ||| |||||| | | | || || || | Sbjct 1598180 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 1598239 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-AC 114456 ||||||| ||| | || | ||| | | | || | || || |||||| | | Sbjct 1598240 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAG---CTTCATCGTAG 1598293 Query 114457 ATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | | | | ||||| | || || || || || |||| | ||| || | || Sbjct 1598294 TTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCA 1598353 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||| |||||||| || || | || || || ||||| || | ||||||||| Sbjct 1598354 CAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGG 1598413 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| ||| || ||||||||||| |||||| |||| | || ||||| || ||| Sbjct 1598414 TTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGG 1598473 Query 114632 GACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC---CC 114687 | || |||||| || | ||| | | | | | || | ||| ||| | | || Sbjct 1598474 GCCTCGAGAATGGCGTACCAAAGCTTTTGAGCCTTG----ATGGTCTTGCGACCCTTGCC 1598529 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 ||||| |||||||||| ||| || || || ||||| || || | || | ||| || Sbjct 1598530 CTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCC 1598589 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || || | || || | || | ||| | ||| || ||||||||||||||||| Sbjct 1598590 AGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAA 1598649 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 || || |||||||| || || ||| ||||| || || | || || | || || Sbjct 1598650 AAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTG 1598709 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 || ||| | || | || || | || ||| | |||||| || || ||||| | || Sbjct 1598710 GTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGC 1598769 Query 114928 GATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAA 114981 | | || | ||| | | ||| |||||| ||||||| || ||| || || Sbjct 1598770 AAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAA 1598826 Query 114982 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGAC 115039 || |||||||| |||| | ||||| ||| || || || || ||| || ||| | Sbjct 1598827 GACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC 1598886 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | | || | | | || | | | ||||||||| || ||| ||| ||||| Sbjct 1598887 --AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCATG 1598944 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 || || | ||||| | ||||||| || || || ||| |||| | | | | | Sbjct 1598945 GCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCCACCAAG 1599004 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||||| |||| ||| ||| || || || || |||||||| || || | || || Sbjct 1599005 AAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1599064 Query 115220 ATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||| | | |||| ||||| || ||| ||||||||||| Sbjct 1599065 GTGA--AGAACTTGCTAGACATGAGATTGTATGTCTCCAAGAC 1599105 >seq3 Length=2226179 Score = 147 bits (162), Expect = 3e-30 Identities = 309/455 (68%), Gaps = 8/455 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 1539483 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 1539424 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876 || || || ||||| | | || | | || || |||| ||||||| Sbjct 1539423 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACC-TTCTCATTGCCAAGAGCGACAAGGAGAC 1539365 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | |||| |||||||||||| ||| ||||||||||| |||| |||| || Sbjct 1539364 GATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCAC 1539305 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | || || || || || |||| ||| |||||| ||||| || | ||| | | Sbjct 1539304 AGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAATGATGATATCCT 1539245 Query 125997 GAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 126053 | || | | | | || | | ||| | || | || ||| || |||||| | Sbjct 1539244 GGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGT 1539188 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 | ||| ||||| |||||||| |||||||| || || ||||| ||| || ||||||| Sbjct 1539187 CAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGA 1539128 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 |||| |||||||| | |||||| || | || | ||| |||||||| ||||| | Sbjct 1539127 GACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAAGATACCCTCAA 1539068 Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 || || || |||| |||||||| ||||||||| Sbjct 1539067 CAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG 1539033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353278922440