Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq39 210 2e-49 >seq39 Length=4506647 Score = 210 bits (232), Expect = 2e-49 Identities = 1056/1668 (63%), Gaps = 36/1668 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||| ||||| || || | | Sbjct 1599234 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTTAAGATTGACGGTAAG 1599175 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 1599174 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 1599115 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | || |||| |||| | || |||| | | Sbjct 1599114 ATCGAGCGAGTCTTGGAGACATACAATCTCATGTCTAGCAAGTTCTTCACGCATG-CTTC 1599056 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 ||| || || ||||| || || ||||| ||| || |||| || || ||| || || Sbjct 1599055 CCCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTGGA 1598996 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || ||||| | ||| | |||||| |||||| | ||||| Sbjct 1598995 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 1598936 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | ||| ||| |||| ||||| | || || ||| Sbjct 1598935 CAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATAC 1598878 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || || || || | || |||||||| || |||||||||||| Sbjct 1598877 ATCGCCGGTACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 1598818 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || ||||||||||| | | | ||| |||| || |||| ||| Sbjct 1598817 ACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 1598758 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | |||| | || || || ||||||||||| || || Sbjct 1598757 GAGCCTTGGCACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAG 1598698 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | || || ||| || || ||| | || || ||||| ||||| || Sbjct 1598697 GAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 1598638 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| | ||||| || | |||||||| || || || || || ||||| Sbjct 1598637 GTTGAAAAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGAC 1598578 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | || || | |||| | ||||| | ||||||||| | Sbjct 1598577 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 1598518 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || | ||| ||||| ||| | || | || | ||| ||||| || Sbjct 1598517 AAGACCATCAAGGCTCAAAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGA 1598458 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | ||| | | |||||| | |||| |||| ||||| || ||||||| Sbjct 1598457 AACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGT 1598398 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || || ||||| || ||| ||||||| | |||| |||||| | Sbjct 1598397 ACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTC 1598338 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674 ||||| || ||||| | ||| | ||| || | ||| | | | |||| | Sbjct 1598337 GCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GAT 1598287 Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAACC 94732 |||| | ||| | || || | || | | | ||| || | || |||| Sbjct 1598286 GAAGCTTGCTACGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTATTCGCAACC 1598229 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 |||||| | | ||||| |||| |||||| |||| |||||| ||| ||| || Sbjct 1598228 TGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGC 1598169 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852 || || ||||| || | || || || || | || || || | | ||||| Sbjct 1598168 GCCACCGACCCATTGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTTCTTGCTCTGCGTA 1598109 Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912 |||||| ||| || ||| || | | || | | || || || | ||||||| Sbjct 1598108 TGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATC 1598049 Query 94913 ACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972 ||| ||| | | ||||| || |||| | ||| | || || || | | Sbjct 1598048 ACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACCT 1597992 Query 94973 TCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 || || || ||| | | | |||| || | ||||| ||| | ||| || ||||| Sbjct 1597991 TCAAGGGTTCCCCC--GCATCTGAGGGTATCCTGCAGTTTGACATGTGGAACGTCAAGCC 1597934 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 ||||| || | || ||||| |||| || | || || | | |||||| | || Sbjct 1597933 CTCGGACCTCTGGGATTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAA 1597874 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | || || ||||| || ||| || | ||||| || ||||||||||| Sbjct 1597873 CAGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGA 1597814 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| |||| ||||||||| | ||| | | || || ||||| || || |||| Sbjct 1597813 GTGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCA 1597754 Query 95211 CGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || |||| || || ||||| || || | ||||| ||||| || Sbjct 1597753 GGTTGTCAATCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTA 1597695 Query 95270 TCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | ||||||| | |||| | || || ||| | |||||||| || | || || Sbjct 1597694 TGAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCT 1597639 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | ||| ||||||| || |||||||| || ||||||||| | |||||| Sbjct 1597638 GCCGACGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 1597591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722934086280