Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq40 82.4 5e-11 >seq40 Length=4096408 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| || || || || || ||||||||||| |||| | | |||| || Sbjct 1051559 AACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTC 1051618 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || ||||| ||| | ||||| || || |||||| || || || |||||||| Sbjct 1051619 AAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 1051678 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| ||| || || | || ||||| ||| | || || || | ||| ||||| || Sbjct 1051679 AATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTT 1051738 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| || || || || || ||||| Sbjct 1051739 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 1051768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391812704255