Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq39 172 7e-38 seq3 154 2e-32 >seq39 Length=4506647 Score = 172 bits (190), Expect = 7e-38 Identities = 1091/1725 (63%), Gaps = 55/1725 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 1597407 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 1597466 Query 115586 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644 | | |||||| | | || | ||||| || | |||| | || || | |||| Sbjct 1597467 CAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 1597525 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||||| ||||| ||||| |||||| || ||||| || ||||| | || Sbjct 1597526 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 1597585 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 || | | ||| ||||| ||||| |||| || ||| | || | ||||| Sbjct 1597586 ACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCGGCAGGGATG 1597645 Query 115765 TCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTT 115821 | || || || || || ||| | || ||| || | | ||||||| | | Sbjct 1597646 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCG 1597702 Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCA 115881 ||||| ||||| || | || |||| | || ||||||||| |||||| Sbjct 1597703 GACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGATTGACAACCTGGAACTCA 1597762 Query 115882 CCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 115941 || ||||| || | | ||||| |||| ||||| ||||| |||||||| ||||| Sbjct 1597763 CCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTG 1597822 Query 115942 CCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGA 116001 |||| || |||| || ||| || ||||| || || | ||| || ||||| |||| Sbjct 1597823 CCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATG 1597882 Query 116002 CCCACCCCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC 116059 || | | | | | | || || | | ||||| || || | | | || Sbjct 1597883 CCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAATCCCAGAGGTCCGAGGGCTTGA 1597940 Query 116060 CCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 116119 | | |||||| |||||||| |||||||| | || || || || |||| || || | Sbjct 1597941 CGTTCCACATGTCAAACTGCAGGATACCCTCAGATGCGGGGGAACCCTTGAAGGTGGAGT 1598000 Query 116120 ATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTG 116176 | || ||||| ||| |||| | ||||| || |||||| |||||||| || | Sbjct 1598001 AGGGACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGG 1598057 Query 116177 TCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACA 116236 ||||||| || | || | | |||||| || || || | | ||| || | Sbjct 1598058 TCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGA 1598116 Query 116237 A-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 116295 || ||| |||| || || ||||| ||||| || ||||| || || || | ||| ||| Sbjct 1598117 GCAAGAAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTA 1598176 Query 116296 GACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355 || ||||| || || || || ||| |||||| | | | || || || Sbjct 1598177 CTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGA 1598236 Query 116356 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 116415 | ||||||| ||| | || | ||| | | | || | || || |||||| | Sbjct 1598237 ATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAG---CTTCATCG 1598290 Query 116416 -ACATACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 | | | | | ||||| | || || || || || |||| | ||| || | Sbjct 1598291 TAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGA 1598350 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 || |||||| |||||||| || || | || || || ||||| || | ||||||| Sbjct 1598351 GCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTT 1598410 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || ||| ||| || ||||||||||||||||| |||| | || ||||| || Sbjct 1598411 TGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTC 1598470 Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC-- 116646 |||| || |||||| || | ||| | | | | | || | ||| ||| | | Sbjct 1598471 TGGGCCTCGAGAATGGCGTACCAAAGCTTTTGAGCCTTG----ATGGTCTTGCGACCCTT 1598526 Query 116647 -CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704 ||||||| |||||||||| ||| || ||||| ||||| || || ||| || | || Sbjct 1598527 GCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC-TCCGTAGCAGTCGGCGA 1598585 Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 | || || || | ||||| | || | ||| | ||| || ||||| ||||||| Sbjct 1598586 GGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCA 1598645 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 |||| || || |||||||| || || ||| ||||| || || | || || | | Sbjct 1598646 TGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTAC 1598705 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | || || ||| | || | || || | || ||| | |||||| || || ||||| | Sbjct 1598706 CGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGA 1598765 Query 116885 CCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTA 116940 || | | ||| | || | | ||| |||||| ||||||| || || ||| Sbjct 1598766 TGGCAAAAGCACCGGGTCGCTTGTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTG 1598824 Query 116941 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAG 116998 || || |||||||| |||| | ||||| ||| || || || || ||| || ||| Sbjct 1598825 AAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAG 1598884 Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058 | | || | | | ||| | | | ||||||||| || ||| ||| ||||| Sbjct 1598885 CC--AGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTTGGAGATCA 1598942 Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118 || || | ||||| | ||||||| || || || ||| |||| | | | | Sbjct 1598943 TGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCCACCA 1599002 Query 117119 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGT 117178 |||||| |||| ||| ||| || || || || |||||||| || || | || | Sbjct 1599003 AGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCAT 1599062 Query 117179 GGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 117221 | ||| | | |||| ||||| || ||| ||||||||||| Sbjct 1599063 GCGTGA--AGAACTTGCTAGACATGAGATTGTATGTCTCCAAGAC 1599105 >seq3 Length=2226179 Score = 154 bits (170), Expect = 2e-32 Identities = 530/813 (65%), Gaps = 15/813 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 1539483 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 1539424 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 127349 || || || ||||| | | || | | || || |||| ||||||| Sbjct 1539423 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACC-TTCTCATTGCCAAGAGCGACAAGGAGAC 1539365 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 |||| | |||| |||||||||||| ||| ||||||||||| |||| |||| || Sbjct 1539364 GATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCAC 1539305 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || || || || || |||| ||| ||||||| || || || | ||| | | Sbjct 1539304 AGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAATGATGATATCCT 1539245 Query 127470 GAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACT 127526 | || | | | | || | | ||| | || | || ||| || ||||| | Sbjct 1539244 GGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CAG-GCAAAGT 1539188 Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586 | ||| ||||| |||||||| |||||||| || || ||||| |||||| ||||||| Sbjct 1539187 CAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGA 1539128 Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646 |||| |||||||| | |||||| || | || | ||| |||||||| ||||| | Sbjct 1539127 GACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAAGATACCCTCAA 1539068 Query 127647 CACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCA 127706 || || || |||| ||||||| |||||||||| | ||| | | ||| | Sbjct 1539067 CAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGA 1539008 Query 127707 TCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 127766 | ||||| | ||||| || ||| || || | ||||| || || | ||||| | Sbjct 1539007 TGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATAGG 1538948 Query 127767 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGA 127826 | | | || ||||||||||| | || ||||| || || || ||| || | Sbjct 1538947 TTCGCTGGGCGGGCTCTTTGATGTATGTGTCGATGAGGAGGGAGTAGGTCTCGGAATGAA 1538888 Query 127827 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 127885 | | ||| || | ||| | ||||||| | || || || ||||| ||||| Sbjct 1538887 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGATCTGGACCTC- 1538830 Query 127886 TCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 127944 | | ||| | | || ||||| || || ||||| || |||| || || || Sbjct 1538829 GCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAAGC 1538770 Query 127945 CAGGATATACTTTATGAATTTCTGTTCATTCTC-GTT--CAGGGTCTTCCAGTCGTCGAG 128001 ||||| | | || ||| |||| | ||| || | |||||||||| ||| Sbjct 1538769 AAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCCAGTCGTGGAG 1538710 Query 128002 ATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||| |||||||| | |||||| |||||||| Sbjct 1538709 ATCCTTGGAGAGATCAATCTCCTCAGCAGTCCA 1538677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506870239880