Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 172 9e-38 >seq3 Length=2226179 Score = 172 bits (190), Expect = 9e-38 Identities = 365/539 (68%), Gaps = 7/539 (1%) Strand=Plus/Minus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | | ||| ||||||||| |||||||||||||| | | ||| || Sbjct 1539489 CTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTT 1539430 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| ||||| | | | ||| |||| | || ||||| | || Sbjct 1539429 CTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCATTGCCAAGAGCGACAAG 1539370 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCA 159806 | | || || || || || ||||| || | ||| | ||| |||| || || || | Sbjct 1539369 GAGACGATCAGCGACGAACTCAATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGGA 1539311 Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866 | | ||| || ||||| | || ||||||| |||||| ||| || || | | | Sbjct 1539310 GGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAATGATGA 1539251 Query 159867 TCTGCGAGA-CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC 159925 | | | || || | | ||| ||| | || || ||| |||||||| Sbjct 1539250 TATCCTGGATCATCTGCTTACT--GGCACGACCCT--TGAGGTGAGAGTGGAGGAGGCAG 1539195 Query 159926 GCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCC 159985 |||||||| ||| || || ||||| |||||||||| ||||||||| | | || || Sbjct 1539194 GCAAAGTCAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCA 1539135 Query 159986 GGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATC 160045 ||||||| |||||| |||||||| || || | || || ||||| ||||| ||||| Sbjct 1539134 GGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAAGATA 1539075 Query 160046 CCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTC 160105 ||||| || || ||||| || ||||| | || |||| |||| || | || ||| || Sbjct 1539074 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATC 1539015 Query 160106 CACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164 || | ||||||| |||||||||||| |||||| || ||| ||| | |||||| || Sbjct 1539014 CATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 1538956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154772604080