Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq40 122 1e-22 >seq40 Length=4096408 Score = 122 bits (134), Expect = 1e-22 Identities = 323/485 (67%), Gaps = 15/485 (3%) Strand=Plus/Plus Query 154629 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 154686 || || ||| | || | |||||||||| || || || | || ||| | || |||| Sbjct 2585589 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 2585646 Query 154687 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 154745 | | ||| || || | ||||| |||| || ||| | || || | || || || || Sbjct 2585647 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGTCTTATCCCTGTTTCTGCTCACGGT 2585705 Query 154746 ACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 154803 || || |||||| ||||| |||||| || ||||| ||||| |||||||||||| | Sbjct 2585706 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGC 2585765 Query 154804 ATGA-TGGTAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 154859 | || ||||||| | || ||| | ||||| || ||| || || | | | | Sbjct 2585766 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 2585822 Query 154860 GAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATT 154919 || || | ||| ||| |||| || |||||||| ||||| || || || | || Sbjct 2585823 GAGCTTGCTGCTATCATGGTTACTTATCCATCTACTTTCGGTGTCTTCGAGCCTGAGATC 2585882 Query 154920 AGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAAT 154979 | || | ||| | | || || || |||| |||| || || | ||||| || || Sbjct 2585883 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTTGTCTACATGGATGGCGCCAAC 2585942 Query 154980 CTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTA 155039 | || || ||| | || || | || |||| |||||| ||||| || ||||| Sbjct 2585943 ATGAACGCTCAGATTGGTCTCTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTC 2586002 Query 155040 AACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATA 155099 ||| | || || || ||||||||||| || || ||||| ||||| || || || ||||| Sbjct 2586003 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGTGGTCCCGGTGTTGGCCCTATC 2586062 Query 155100 GGTGT 155104 | ||| Sbjct 2586063 GCTGT 2586067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212488673120