Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq40 136 5e-27 >seq40 Length=4096408 Score = 136 bits (150), Expect = 5e-27 Identities = 326/485 (67%), Gaps = 15/485 (3%) Strand=Plus/Plus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | |||||||||| || || || | || ||| | || |||| Sbjct 2585589 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 2585646 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || ||| | || || | || || || || Sbjct 2585647 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGTCTTATCCCTGTTTCTGCTCACGGT 2585705 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | Sbjct 2585706 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGC 2585765 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534 | || ||| ||| | || ||| | ||||| || ||| || || | | | | Sbjct 2585766 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 2585822 Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594 || || | ||| ||| |||| ||||||||||| ||||| || || | | ||| Sbjct 2585823 GAGCTTGCTGCTATCATGGTTACTTATCCATCTACTTTCGGTGTCTTCGAGCCTGAGATC 2585882 Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 | || | ||| | |||| || ||| |||| |||| || || | ||||| || || Sbjct 2585883 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTTGTCTACATGGATGGCGCCAAC 2585942 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | || || ||| | ||||| | || ||||| |||||| ||||| || ||||| Sbjct 2585943 ATGAACGCTCAGATTGGTCTCTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTC 2586002 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 ||| | || ||||| ||||||||||| || || ||||| ||||| || || || ||||| Sbjct 2586003 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGTGGTCCCGGTGTTGGCCCTATC 2586062 Query 159775 GGTGT 159779 | ||| Sbjct 2586063 GCTGT 2586067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050883922480