Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 109 6e-19 >seq3 Length=2226179 Score = 109 bits (120), Expect = 6e-19 Identities = 361/558 (65%), Gaps = 5/558 (1%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| ||| || || || ||||| | | || | || || || || || | | Sbjct 1539197 CAGGCAAAGTCAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGA 1539138 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||| || || | || || | |||||| ||||| || || | ||| |||||| Sbjct 1539137 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAAG 1539078 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCA-TCATTATTATG 19139 ||||| || || || ||||| ||||| || | | || || || | || |||| || Sbjct 1539077 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCA-AAGGAGGAGTCCTTATCCTG 1539019 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199 |||||| | ||||| |||||||||||| | || || || ||||| || | || Sbjct 1539018 GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTT 1538959 Query 19200 AAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 || ||||| | |||| | | ||||| | |||| || || | | ||| | Sbjct 1538958 GAAGAGATAGGTTCGCTGGGCGGGCTCTTTGATGTATGTGTCGATGAGGAGGGAGTAGGT 1538899 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 || |||||||| || || || ||||| || ||||| || || | || || | || Sbjct 1538898 CTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGAT 1538839 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 ||| || || | || |||| ||||| | || || || || || |||||| || || Sbjct 1538838 CTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGC 1538779 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTA---ATGTATTCCA 19436 || || || | | || | ||| | ||||| | |||| | ||||| Sbjct 1538778 GAAGAAAGCAAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCCA 1538719 Query 19437 ATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTT 19496 || | | ||| || || | ||| | || ||| | ||||| || |||||||| || || Sbjct 1538718 GTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTT 1538659 Query 19497 TTTATACATGTTCCATAT 19514 || ||||| | ||| || Sbjct 1538658 CTTGTACATTTGCCAAAT 1538641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108497866520