Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-14 seq12 87.8 1e-11 >seq1 Length=5220104 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || ||||| || || || || |||||||| || || |||||||| | || Sbjct 3000493 ACTGTCCCTGCCTATTTCAACGATTCTCAGCGTCAAGCCACCAAGGATGCTGGTCTCATC 3000434 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || ||||| ||||| || || ||||| || ||||||||||| || |||| || || Sbjct 3000433 GCCGGTCTTAACGTTCTCCGAATCATCAACGAGCCTACTGCTGCCGCCATTGCCTACGGT 3000374 Query 550529 CTTGATAA 550536 ||||| || Sbjct 3000373 CTTGACAA 3000366 >seq12 Length=5052385 Score = 87.8 bits (96), Expect = 1e-11 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063 ||| | ||||||||||| || ||||| ||||| ||| || || || || || ||| | Sbjct 1773536 GATCTTGGAACCACATACAGCTGTGTCGGTGTGATGCAGAAGGGCAAGGTCGAGATTCTC 1773595 Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 | ||| ||||| |||||| ||| ||||| ||||| || | ||||| || || | | Sbjct 1773596 GTCAACGATCAGGGTAACCGAATCACTCCCTCTTACGTCGCCTTCACCGAGGACGAGCGT 1773655 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTAT 550176 |||||||| || || || || | || ||| | | ||| || || || || || Sbjct 1773656 TTAGTTGGAGACGCCGCCAAGAACCAGGCCGCCGCTAACCCCACGAACACCAT 1773708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293725966070