Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq39 361 1e-94 seq3 185 2e-41 >seq39 Length=4506647 Score = 361 bits (400), Expect = 1e-94 Identities = 1155/1762 (66%), Gaps = 92/1762 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||||||||| Sbjct 1597403 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTG 1597462 Query 212613 AGGCCCTTGCCCCAGCCGTGCAT-GTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTG 212671 ||||| |||||| |||| |||||| |||| |||| | || | | Sbjct 1597463 AGGCCAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGA---TCTTGCCC---ATCGTGGG 1597515 Query 212672 GTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCT 212731 ||| | | |||| | |||||| ||||| ||| || ||||| | | | Sbjct 1597516 GTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCG 1597566 Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||||| ||||| | | || | | ||| |||| |||||| || |||||| | | | Sbjct 1597567 ATCAGCAGCCATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGC 1597626 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC-- 212849 |||| ||| | |||| | ||| |||||||| | || || || ||||| Sbjct 1597627 CTTGACGTCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAGCAA 1597679 Query 212850 TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGG 212903 || | ||| ||| | ||| ||| || ||| || | ||| ||||| ||| Sbjct 1597680 TG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGC 1597738 Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963 || ||||| | |||||| ||||| | ||| || | | ||||| | || || ||| Sbjct 1597739 CAGGGATTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTG 1597798 Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023 |||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| ||| Sbjct 1597799 TAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGA 1597858 Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TCTGC 213079 || | || |||||||| | | ||||| | | ||| | ||||| ||| | Sbjct 1597859 GCAAGGAGCAGACTGTTACGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGTCT-C 1597914 Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT 213139 ||| ||||| |||||| | ||| |||||||||||||||||||||| ||| Sbjct 1597915 CCAATCCCAG---------AGGTCCGAGGGCTTGACGTTCCACATGTCAAACTGCAGGAT 1597965 Query 213140 GCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCA 213195 || |||| ||||| |||| | | | ||||||||| || | |||||| |||| Sbjct 1597966 ACC----CTCAGATGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 1598021 Query 213196 GCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGC 213254 ||| ||| ||| || |||||||||| || ||||| ||||| |||| | |||||||| Sbjct 1598022 GCT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCAAAGATCTGCTTGTTGAGC 1598080 Query 213255 TTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACA-CATCAGCCAGCCC 213313 | ||||| || ||| ||||||||| || | | ||| | |||| || || || Sbjct 1598081 TCACGAGCCTCGGGTGACTCGAAGGGCATACGCA-GAGCAAGAAAAGCATCGGCAAGGCC 1598139 Query 213314 CTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGG 213372 || || || | || ||||||| ||| | || |||| ||| |||| ||||| | | Sbjct 1598140 TTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGACAG 1598198 Query 213373 GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGG 213432 |||| ||| |||||||||||||| |||||||| | | || | |||| | | Sbjct 1598199 GGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGT 1598258 Query 213433 CCAGGTACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGG 213486 || || | ||||| |||||| | ||| | | || ||||| | Sbjct 1598259 GCA---AC---TTCTTGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAGAG 1598312 Query 213487 CGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGG 213546 | ||| |||||||| || || ||||| | || | |||||| || || || | Sbjct 1598313 ACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAG 1598372 Query 213547 TGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTGGCA 213605 |||| |||||| || ||||||||| || ||||||| ||||| ||| ||||| | ||| Sbjct 1598373 TGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT--ACTCTTGCGGTTGCA 1598430 Query 213606 -GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT 213664 | |||||||||||||||| | ||| |||||||| ||||| | | || || | Sbjct 1598431 GGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTA 1598490 Query 213665 CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTC 213724 ||| || | ||||||| | | ||| | | | | |||||||| ||| Sbjct 1598491 CCAAAGCTTTTGAGCCTTGATGGTCTTGC-GACCCTTGCCCTCCT--TCTCGTACTTTTC 1598547 Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACA 213784 ||| || | | ||| || | || || | | || || || || |||||| Sbjct 1598548 GTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACA 1598607 Query 213785 CATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 ||| || ||||||| |||| | | || | || |||||| || || |||| ||| || Sbjct 1598608 CATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAG 1598667 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 || ||| || || | || | ||| ||| || ||| || || ||||| || Sbjct 1598668 GGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAG 1598727 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCT 213961 || || |||| || | |||||| ||||| | |||||||||||| || || | || | Sbjct 1598728 GAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT 1598787 Query 213962 CTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 ||||| |||||||| || || || ||||||||| || || | || || | Sbjct 1598788 GTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAC 1598847 Query 214022 CCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCT 214078 || || || ||| |||||||| || || || || ||||| | || | | | ||| Sbjct 1598848 ACCATTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCA 1598906 Query 214079 CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTC 214138 ||| ||| || || ||||| || ||||||||||||||| ||| | | | ||| || Sbjct 1598907 CATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 1598964 Query 214139 CATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGG 214198 ||| || | || ||||| || | | | || ||||||||| || | ||||| Sbjct 1598965 GTAGATTCCCTCAATACTGTCGTCCTTCATATCCACCAAGAAGCAAGATGACAATTGGGG 1599024 Query 214199 CCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAG 214258 | | | ||| | ||||| ||||||||| ||||| | | |||||| |||| | Sbjct 1599025 CTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACAT 1599084 Query 214259 GAGCCTGTAGGTCTCCAGGACT 214280 ||| |||| ||||||| |||| Sbjct 1599085 GAGATTGTATGTCTCCAAGACT 1599106 >seq3 Length=2226179 Score = 185 bits (204), Expect = 2e-41 Identities = 485/733 (66%), Gaps = 19/733 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1539486 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 1539427 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957 ||||||| ||||||||||| | || || ||| | ||| ||| | || | | Sbjct 1539426 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCATTGCCAAGAGCGACAAGGA 1539368 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||| ||||| | ||||||| ||||||||| | ||||| Sbjct 1539367 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1539308 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || || ||| | ||||| ||||||| ||| || ||||| || | || Sbjct 1539307 -CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAATGATGATA 1539249 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG------GCATAGAGCATG 48130 | || ||| || | || | || | | |||| | | ||| | | Sbjct 1539248 TCCT-------GGA-TCATCTGCTTACTGGCAC-GACCCTTGAGGTGAGAGTGGAGGAGG 1539198 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||| | |||||||| || ||||||| |||||||||| ||| Sbjct 1539197 CAGGCAAAGTCAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGA 1539138 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || ||||||||||| || | ||||| | ||| |||||| Sbjct 1539137 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAAG 1539078 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || || || || ||| | || | || || | || ||| || | Sbjct 1539077 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGG 1539018 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | |||||||| |||||||| |||||| || || ||||| ||||| | Sbjct 1539017 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 1538958 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 ||||| | | | || | | || | || || || || | ||| || Sbjct 1538957 AAGAGATAGGTTCGCTGGGCGGGCTCTTTGATGTATGTGTCGATGAGGAGGGAGTAGGTC 1538898 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || || || | ||||| || ||||||||| ||||||||| | |||||| | | Sbjct 1538897 TCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGATC 1538838 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || ||||| ||| | || ||||| ||||| || ||||| || ||||| Sbjct 1538837 TGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCG 1538778 Query 48551 AAGAAGGCAAGGA 48563 ||||| ||||||| Sbjct 1538777 AAGAAAGCAAGGA 1538765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532299301120