Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq39 232 1e-55 seq3 187 5e-42 >seq39 Length=4506647 Score = 232 bits (256), Expect = 1e-55 Identities = 831/1279 (65%), Gaps = 49/1279 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||| || ||||||||||||||| ||||||||| ||| | |||||||| Sbjct 1598036 GTGAGGGCAGCGTGATAAATGGTCTCAAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 1598094 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || ||||||||||||||| |||| | ||||| || || || || || | ||| Sbjct 1598095 TGACTCGAAGGGCATACGCAGAGCAAGAAAAGCATCGGCAAGGCCTTGAACACCAAGACC 1598154 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | |||| | ||| | || |||| || || || ||| || Sbjct 1598155 AATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCACA 1598212 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| ||||| || | | || | | |||| | || ||||| | Sbjct 1598213 TCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAG 1598272 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | ||| | | ||| || || | || | | || | | | Sbjct 1598273 TCGTAG--CAAG-CTTCATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAG 1598320 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || |||||||| |||| || || || || || ||| Sbjct 1598321 GCAAGGTTGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGG 1598380 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| || |||||| || |||| || || ||| |||||| ||| || |||||| Sbjct 1598381 TTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCTTG 1598440 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 |||||||| || || || ||||| ||| ||| | ||||| || ||| || | | Sbjct 1598441 TAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTT 1598500 Query 221894 CTGGCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAG 221947 || | | ||| | |||| | | |||| |||||| ||| || Sbjct 1598501 TGAGCCTTGATGGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTAC-------AG 1598553 Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007 ||| | | |||| || ||||| ||| | ||||| || ||| | |||||||||| Sbjct 1598554 AGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATC 1598611 Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067 || |||||| ||| | || || | || |||||| || || |||||||| || || Sbjct 1598612 AGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCA 1598671 Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127 | || ||||| | || || ||||||| |||| ||| || | ||||| | || Sbjct 1598672 AGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAA 1598731 Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187 || || | |||| |||||| ||||| || |||| ||| | ||| ||||||||||||||| Sbjct 1598732 TCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTG 1598791 Query 222188 CCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246 |||||||| || | ||| | ||| | |||||||| ||||| | || || | || Sbjct 1598792 CCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACC 1598850 Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCAG 222305 || ||| ||||||||| || ||||| | || || | | ||| | ||| Sbjct 1598851 ATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GAATACGGTGCAC 1598907 Query 222306 A--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363 | | || |||||||| || || ||||||||||| ||| |||||||||| || Sbjct 1598908 ATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTA 1598967 Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423 ||| ||||| ||| ||| ||||| | | || || || ||||| |||| || | | Sbjct 1598968 GATTCCCTCAATACTGTCGTCCTTCATATCCACCAAGAAGCAAGATGACAATTGGGGCTG 1599027 Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483 | || | ||| || || |||||||| || || || ||| | |||||||| || Sbjct 1599028 AGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATGAG 1599087 Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATCTC 222541 || ||| ||||| | ||||| |||| | || ||| || | | || | | || | | Sbjct 1599088 ATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA-GACACA-CGC 1599145 Query 222542 ATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATT 222599 ||| ||||| ||| || | ||| ||| || | | || || ||||| ||| Sbjct 1599146 ATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT--TAAGGAGGTATGATC 1599203 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 |||| ||||||||| |||||||| | | | || || | | | | ||| | ||| | Sbjct 1599204 GCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAAACAATGGCAG 1599263 Query 222660 CGTCCAGCTCCGACTTGTG 222678 ||||| |||| ||| || Sbjct 1599264 AGTCCAACTCCTCCTTATG 1599282 >seq3 Length=2226179 Score = 187 bits (206), Expect = 5e-42 Identities = 388/572 (68%), Gaps = 13/572 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | || |||||| || || ||||||||||| Sbjct 1538641 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1538700 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || || ||| | || |||||| ||| || Sbjct 1538701 TCCAAGGATCTCCACGACTGGAACAACCGC-CTAACTGCTGATGAGCAGTTCTTTGTCTC 1538759 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || ||||| || |||||||||||||| || |||||||| || |||| | Sbjct 1538760 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCG 1538819 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | || || ||| | ||||| || |||||||| |||||||| || Sbjct 1538820 ATTCAGTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGAT 1538879 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | || || ||| || || || || || || ||||| | ||| Sbjct 1538880 GGAGAACATTCATTCCGAGACCTACTCC---CTCCTCATCGACACATACATCAAAGAGCC 1538936 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 |||| || || || || ||||| ||| ||| ||| ||||| | |||||| Sbjct 1538937 CGCCCAGCGAACCTATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGC 1538996 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||||| |||||| | || | | | |||| | |||| || || || Sbjct 1538997 TGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGC 1539056 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||||||||| ||||| ||||| || || ||| | || || | |||||||||||||| Sbjct 1539057 CTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAA 1539116 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || || |||||| || ||| ||||| ||||||||||||||| | ||||| | Sbjct 1539117 GAAGCGTGGTCTCATGCCTGGTCTG-ACTTTCTCCAACGAGCTCATCTCTCGTGACGAAG 1539175 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||| |||| || ||||||||||| ||| || Sbjct 1539176 GTCTTCACACTGACTTTGCCTGCCTCCTCCAC 1539207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844300745920