Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq40 129 7e-25 >seq40 Length=4096408 Score = 129 bits (142), Expect = 7e-25 Identities = 275/407 (68%), Gaps = 9/407 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 2586067 ACAGCGATAGGGCCAACACCGGGACCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 2586008 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 2586007 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 2585948 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| | || || |||| |||| || || || | | ||| | Sbjct 2585947 TTCATGTTGGCGCCATCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 2585888 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| |||||||| |||| ||| ||| | Sbjct 2585887 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGATGGATAAGTAACCATGATAGCAGCA 2585828 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 2585827 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 2585771 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| Sbjct 2585770 GTCTTGCCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 2585711 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 || || || || || || | || || ||||| || |||| ||||| Sbjct 2585710 TTGGTACCGTGAGCAGAAACAGGGATAAGACAGACCTTTCGCTTATC 2585664 Score = 109 bits (120), Expect = 6e-19 Identities = 170/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | || ||||| ||||||| || || || || || || || |||||||| Sbjct 2584916 ACCGTGGTAAACAGCGTAGAAAGCAGACATGTTGGCAAGAAGAGCCTGAGCAGTGCAGAT 2584857 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| ||||| || || || | | ||| |||||||| | ||| || || || | | Sbjct 2584856 GTTGCTGGTAGCCTTCTCACGACGAATGTGCTGCTCACGAGTCTGGAGAGCCAGGCGAAG 2584797 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||||| ||||| | ||| || ||| |||| | ||||| ||||| | ||| Sbjct 2584796 AGCAGGTTTGCCGAGACGATCCTTGGAAACACCAACAAGACGTCCAGGAATCTTGCGCTT 2584737 Query 139451 ATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || | ||| || ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct 2584736 GTACTTCTCAGATGTAGCGAAGAAAGCAGCATGGGGACCACCGTAGCCGAGAGGAACACC 2584677 Query 139511 AAA 139513 || Sbjct 2584676 GAA 2584674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998088788360