Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq39 228 1e-54 seq3 120 4e-22 seq1 87.8 2e-12 >seq39 Length=4506647 Score = 228 bits (252), Expect = 1e-54 Identities = 1142/1781 (64%), Gaps = 51/1781 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 1599163 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1599104 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| | ||||| |||| | | ||| || || | || || ||| Sbjct 1599103 CTTGGAGACATACAATCTCATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 1599046 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||| || || || || || |||| ||||||| | | | | ||||| Sbjct 1599045 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTGGATATGAAGGAC 1598986 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 1598985 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 1598926 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || |||||||| | | | || | | | || | | ||| || ||| || | Sbjct 1598925 GGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 1598868 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || | Sbjct 1598867 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 1598808 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622 |||| | || | | ||| | || | ||| | | || ||||| | || || ||| Sbjct 1598807 ATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 1598749 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | || |||||||| | || ||||| ||| | || |||| || | Sbjct 1598748 CACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TCCG 1598690 Query 75683 TGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 || | ||||| ||| | | |||| ||||| || || |||||||||||||| ||||| Sbjct 1598689 TGCCCGTGATCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAA 1598631 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || ||| | ||| | || | ||||| || || || || ||| ||||| | Sbjct 1598630 AGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACG 1598571 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGA 75857 | |||||||| || || || ||| |||||| || ||||||| | | ||| || Sbjct 1598570 GAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAA---GA 1598514 Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | | || | | | | ||||| | || |||||| | | ||||| ||||| |||| Sbjct 1598513 CCAT-CAAGGCTCAAAAGCTTTGGTACGCCATTCTCGAGGCCCAGACTGAGACCGGAAAC 1598455 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 |||| ||||| ||||||||||| || ||| ||||||||||||||||| | || || Sbjct 1598454 CCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACC 1598395 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| || |||||||| |||||| | |||||| | | || ||| ||| Sbjct 1598394 ATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGCT 1598335 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACT 76093 || ||||| | || || | | || || | ||| | || || || || Sbjct 1598334 GTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGC--- 1598278 Query 76094 TTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 | || | | || || || || | ||| || |||||| || || ||| | Sbjct 1598277 TACGACT-TCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGAT 1598219 Query 76153 CATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 ||| || || || || || || || || || ||| ||||| ||| |||| Sbjct 1598218 CATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACC 1598159 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTG 76271 |||||| | ||||||||||| || || |||| ||| || | ||| | | | || | Sbjct 1598158 CATTGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTTCTTGCTCTGCGTATGC-CCTTCG 1598100 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | ||| || || ||| | || | |||||||| ||||| |||||||| ||| Sbjct 1598099 AGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATCACGCTGCCC 1598040 Query 76332 TGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390 | || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 1598039 TCACTGC-CTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 1597981 Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAA-ACCAAGCTCAACTA 76449 ||||| || | || | || |||||||| |||| |||| || || || | | || Sbjct 1597980 CCCGCATCTGAGGGTATCCTGCAGTTTGACATGT-GGAACGTCAAGCCCTCGGACCTCTG 1597922 Query 76450 CGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 || ||||| | ||| ||||| ||||| | || | ||||||||||| | Sbjct 1597921 GGATTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGCATCCGTAACAGTCTGCT 1597865 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | || || ||||| || ||| ||| | || || |||| || || || ||||| || Sbjct 1597864 CCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGA 1597805 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || ||||| | || ||||||| | | ||||| |||||||| ||||||| Sbjct 1597804 GCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAA 1597745 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 76686 || |||| ||||| | || ||||| |||||| | | ||||||| | | Sbjct 1597744 TCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCG 1597685 Query 76687 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746 ||| | | | |||||||||||| || || | | ||||| | || ||||| Sbjct 1597684 CATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGC 1597625 Query 76747 TCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCG 76806 ||| ||| || || ||||| ||| | | ||| || | ||||| || ||||| Sbjct 1597624 TCTGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCG 1597565 Query 76807 TGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATG 76864 ||| ||||||||||| |||| ||| |||| | |||| | || |||||| Sbjct 1597564 AGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATG 1597507 Query 76865 TCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTA 76923 |||| || | |||||| | || | || ||||||| || ||||| ||||| ||||| Sbjct 1597506 GGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAACTTGGCCTCAAGACCGGCATGTA 1597448 Query 76924 CTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||| || || || |||| || || |||||||||| Sbjct 1597447 CTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 1597407 >seq3 Length=2226179 Score = 120 bits (132), Expect = 4e-22 Identities = 331/499 (66%), Gaps = 10/499 (2%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 1538989 AAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 1539047 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| ||||| ||| |||||||||||||| || | ||| | |||| | Sbjct 1539048 TCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGCCTTCGCCTCTATCTT 1539107 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| || || ||||| || || || || || || Sbjct 1539108 CTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCG 1539167 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 || || ||||| ||| || |||||| || ||| || | || | || | | Sbjct 1539168 TGACGAAGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 1539224 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| || | | ||||| | ||| | | || || || |||||| | | ||| Sbjct 1539225 TGCCAGTAAGCAGATGATCCAGGATATCATCATTGATGCCGTCACCATTGAGCAGGAGTT 1539284 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | || || || || || ||| ||| |||| ||||||||||| ||| |||| Sbjct 1539285 CCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTA 1539344 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCCACCCATTTGGAACG 65437 |||||||| || | ||||||||||| |||| || | | | || | Sbjct 1539345 CATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAATGAGA-AGGTCTACAAGG 1539403 Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497 | | || || || ||||| ||||| ||||| ||||| ||| |||||||||||||| | Sbjct 1539404 CCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCG 1539463 Query 65498 AGAAGCGAGTTGGGGACTA 65516 ||||||| |||| ||||| Sbjct 1539464 AGAAGCGTGTTGCCGACTA 1539482 >seq1 Length=5220104 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || |||| ||| ||||||||||| || Sbjct 1546340 GCGCTCTAGAACAAGTTGAGCAATGCGGTCGCCTTCCTTCACCTCAAAGTCGGATTCGTT 1546281 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||||| ||| || |||| ||| || ||||| || || Sbjct 1546280 ATGGTTGAAGAGCAGGACCTTGACTTGACCACGGTAATCGGCATCGATGACACCAGCGCC 1546221 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||| ||||| ||||| || || | || |||| Sbjct 1546220 TGTGTCAATGAAATGCTTGGAAGCCAGACCTGATCGAGGGGCGATGCGTCCAT 1546168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569279343840