Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq39 205 3e-47 seq3 159 1e-33 seq1 107 6e-18 seq34 102 2e-16 >seq39 Length=4506647 Score = 205 bits (226), Expect = 3e-47 Identities = 597/910 (66%), Gaps = 17/910 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | ||| ||| ||| ||||| || || |||||| || | ||||| ||||| Sbjct 1598356 GTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 1598415 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || | ||| || ||||||||||| || ||| ||||| |||| ||||| |||| || Sbjct 1598416 ACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 1598475 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || || || |||| |||| ||| Sbjct 1598476 CTCGAGAATGGCGTACCAAAGCTTTTGAGCCTTGATGGTCTTGCGACCCTTGCCCTCCTT 1598535 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || |||| || | ||| | | | ||||| ||||| || || || |||||| Sbjct 1598536 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 1598593 Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924 |||| | ||| || | ||| | ||| | || || | | |||||| ||| || Sbjct 1598594 CACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATGAAA 1598650 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | |||| ||||| ||| |||||| || | || |||||| | ||||| Sbjct 1598651 AGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGG 1598710 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || | ||| || | ||||| || ||||| || || || ||| Sbjct 1598711 TTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 1598770 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 ||| ||| | |||| |||||||| || |||||||||||||| || ||||||||| Sbjct 1598771 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 1598830 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| || |||||| || || || ||||| ||| || | || |||| Sbjct 1598831 CGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 1598890 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220 | |||| | || | || ||| ||||||||||| | |||| || || || || || Sbjct 1598891 GCACGAATACGGTGCACATTTAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 1598949 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 ||| | ||||| | | || || |||||| || || | ||| | | |||| Sbjct 1598950 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCCACCAAGAAGCA 1599009 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 || ||||| || | || || || || ||||| || || || | ||||| | || Sbjct 1599010 AGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAA 1599069 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGAA 156399 |||| ||||||| || |||||||||| | ||| | || | |||| | | Sbjct 1599070 GAACTTGCTAGACATGAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG-A 1599128 Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTC 156459 ||| | ||| || | ||| ||| |||||||| ||||| |||||| || ||||| Sbjct 1599129 TACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT 1599188 Query 156460 GCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGT 156519 || ||||||| || |||| ||| || || || || || | | | ||||| |||| Sbjct 1599189 TAAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGT 1599248 Query 156520 TGTAATCAAT 156529 ||| |||| Sbjct 1599249 CATAAACAAT 1599258 >seq3 Length=2226179 Score = 159 bits (176), Expect = 1e-33 Identities = 248/352 (70%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 133307 gAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366 || || ||| ||| || || | ||||| |||||| || || ||||| || || Sbjct 1538845 GAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATTCATTCCGAGACCTAC 1538904 Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCC 133426 || || || || || ||||||||||| ||| |||| | | || ||||||||| Sbjct 1538905 TCCCTCCTCATCGACACATACATCAAAGAGCCCGCCCAGCGAACCTATCTCTTCAACGCC 1538964 Query 133427 ATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485 ||| | || |||| || || |||||| |||||||||| || |||||||||||| Sbjct 1538965 ATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGA 1539023 Query 133486 CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt 133545 ||| | ||||| ||||||||||| ||||||| || ||||| || || || Sbjct 1539024 TAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTT 1539083 Query 133546 CAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTG 133605 |||||||| ||| |||||| || ||||| || ||||||||| | | ||||| ||| Sbjct 1539084 TAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGAC 1539143 Query 133606 TTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 ||| || ||||| || || || | ||||| | |||||||| || |||||| Sbjct 1539144 TTTCTCCAACGAGCTCATCTCTCGTGACGAAGGTCTTCACACTGACTTTGCC 1539195 >seq1 Length=5220104 Score = 107 bits (118), Expect = 6e-18 Identities = 204/296 (69%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||||||||| ||| | || || || || Sbjct 3135612 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACTGCA 3135671 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 |||||||| ||||| | |||||| |||| || |||||||| | || | || || || Sbjct 3135672 GTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAATTC-GCTGGGAGTGAG 3135730 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | ||| |||| ||||| ||||| ||||| || || | ||| |||||| Sbjct 3135731 ACCACGGAGGTAAGAGTTCTCGACGAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 3135790 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || | || | | || | || | || |||||||| || || || | || Sbjct 3135791 GAAGTGAGGTAATGTGCGATACTTGAAACCAAAAGGAATACGCTTGCCTTCGACAATTTG 3135850 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCC 302864 ||| || | || | |||| || |||||||| || || | ||||||||| || Sbjct 3135851 CTGACCGACAAGCGCAGTCATTTGAGAAATATTGATAGATGA--GCCCTTGGAACC 3135904 Score = 84.2 bits (92), Expect = 6e-11 Identities = 128/182 (70%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || ||||||| | |||| ||||||||| |||||||| || | ||| ||||||||||| Sbjct 3027942 GAAGCACCGTAGGCGATCAAACAATCACGTTCCATTTCTCCCAGACGTAGACCACCATCT 3027883 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCG 251597 || | | ||| || | ||||||||| ||||| | | ||||| ||| ||| | Sbjct 3027882 CGTGAACGACCTTCTGTAGGCTGACGCGTGAGGATGGCTCGGGGACCTCGAGATCGAGAG 3027823 Query 251598 GCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 || ||| || | ||||| |||||||| ||||||||| | || ||| |||| Sbjct 3027822 ----TGCATCTTGTCTTGCACCATGTGCTTGAGTCGCTGGTAGTAGATAGGTCCGTTGAA 3027767 Query 251658 GA 251659 || Sbjct 3027766 GA 3027765 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || ||||| |||| ||||| |||||||| ||||| || Sbjct 3134835 AGAATTTCCTTGAGACGTGGCACACCGAGGGTAACGTT---CTTGGACGACACACCGGCG 3134891 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || ||||| || | || |||| |||||||||||| || || || | Sbjct 3134892 AAATGGAAGGTGTTCAGTGTCATCTGGGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 3134951 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 3134952 ACACCAACCATTTCACCAGG 3134971 >seq34 Length=4540351 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 4033023 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 4032964 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | ||||||||||||||| ||||| || ||||| Sbjct 4032963 TCCTTCAGGAAAGCAGCGGCACCGTGAGCAATCATACAATCACGTTCCATCTCTCCGAAT 4032904 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || ||||||||||| ||||| | ||||||| |||| || || || Sbjct 4032903 CGGAGACCACCATCACGAGCACGACCCTCGACAGGTTGTCGGGT 4032860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816789120491