Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 4e-12 >seq3 Length=2226179 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 || || || |||||| |||||| ||||| |||||| ||||| ||| ||||||| Sbjct 1539049 CTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGCCTTCGCCTCTATCTTC 1539108 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||| ||||||||||| | |||||||| || | || ||||| | ||||||| | Sbjct 1539109 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGT 1539168 Query 131981 GATGAAGCATTGCATACTGAATTTGC 132006 || |||| | || ||||| ||||| Sbjct 1539169 GACGAAGGTCTTCACACTGACTTTGC 1539194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812146140323