Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq40 102 2e-16 >seq40 Length=4096408 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| | || || ||| |||||| |||| Sbjct 1051012 AAGACACTCACTGGAAAGACCATCACCCTTGAGGTCGAATCCAGTGACACTATCGACAAC 1050953 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || || || || || | |||||||| Sbjct 1050952 GTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTCTTATCTTT 1050893 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | || ||| ||| |||||| ||||||| ||||| Sbjct 1050892 GCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAGTCA 1050833 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||| ||| | ||||||| Sbjct 1050832 ACTCTTCACCTCGTTCTCCGACTTCG 1050807 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| ||||||||||| ||||| ||||||| || ||||| ||| || Sbjct 1050807 CGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG 1050866 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||||||||| || || |||||||| || || ||| Sbjct 1050867 CGACCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGA 1050911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820148890603