Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq39 161 1e-34 seq3 114 2e-20 >seq39 Length=4506647 Score = 161 bits (178), Expect = 1e-34 Identities = 569/880 (65%), Gaps = 14/880 (2%) Strand=Plus/Plus Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410 ||| || || || || | || |||||||| ||| ||||| |||||||| || || || Sbjct 1598392 GATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 1598451 Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470 || | || || ||| |||| | |||| ||| | | ||||| ||| || || Sbjct 1598452 TGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTTTGAGCCTTGAT 1598511 Query 69471 TACGGTCTTGTAACGCTT---CTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCA 69525 ||||||| || ||| ||| || || || | | ||| | |||| ||||| || Sbjct 1598512 ---GGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCC--TCGAACTCC 1598566 Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585 ||||| | || | | ||||| || || || |||||||||| || ||| || | Sbjct 1598567 TCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCG 1598626 Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTG 69645 | | | ||| || ||||| || ||||| || |||||||| || | || ||||| | | Sbjct 1598627 TTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGG 1598686 Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705 | | || || || || || || ||||| || || || | | |||||| Sbjct 1598687 GCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAG 1598746 Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765 ||||| || || || || || || | | || ||||| || || || ||||| || | Sbjct 1598747 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACA 1598806 Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825 || | |||||||| || |||| | ||||| |||| || |||||| ||| |||| || Sbjct 1598807 TACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTG 1598866 Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCT 69885 || || | || || || | || |||||| | | |||||| || || || Sbjct 1598867 GTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCA 1598926 Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945 ||||| || ||||| | ||||| || | || || || || ||||| || || || Sbjct 1598927 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCG 1598986 Query 69946 TCTATCATGTTAAG-AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004 || |||| | | ||||| || | |||| ||| | || || || ||||| || Sbjct 1598987 TCCTTCATATCCACCAAGAAGCAAGAT-GACAATTGGGGCTGAGGGGTGCCGGCATTGAA 1599045 Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGC 70064 | || || || || || ||||| | || ||| | ||||||||||| || | | Sbjct 1599046 GAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATGAGATTGTATGTCTCCAAGAC 1599105 Query 70065 TGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTC 70123 | || ||||| ||| | || || | | |||||||| | ||| |||||||| | Sbjct 1599106 TCGCTCGATATCATCACCCCAG-ATACCAACAGACACACGCATGATCATGTGCTGAGGGC 1599164 Query 70124 GTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAA 70183 | || || | ||| | || || | ||||||||| |||| ||| || || |||| Sbjct 1599165 GCTCGACAATCTTACCGTCAATCTTAAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAA 1599224 Query 70184 AATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGA 70223 | || | |||| || || | || |||| ||| |||| Sbjct 1599225 AGTATTGGTATTGGAAATCGCGGTCATAAACAATGGCAGA 1599264 >seq3 Length=2226179 Score = 114 bits (126), Expect = 2e-20 Identities = 363/559 (65%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| |||||| || || || || || | | || | ||||| || || || || Sbjct 1539198 GCAGGCAAAGTCAGTGTGAAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAG 1539139 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| ||||||||||| |||||||| || || | || || | ||| |||||| Sbjct 1539138 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTAAAGAA 1539079 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TG 39792 ||| || || || || ||||| ||||| || | || | | | || ||| || Sbjct 1539078 GATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTG 1539019 Query 39793 TATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | || ||||| ||||| ||||| | || || || || || || || | Sbjct 1539018 GATCCATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 1538960 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 | |||||||| | | | ||||| | ||||| || || | || || Sbjct 1538959 TGAAGAGATAGGTTCGCTGGGCGGGCTCTTTGATGTATGTGTCGATGAGGAGGGAGTAGG 1538900 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || ||||| ||||| || ||| ||||| || ||||| || || | || |||| | Sbjct 1538899 TCTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCAGGGA 1538840 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| || |||| || | | || || || || || |||||| || | Sbjct 1538839 TCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAG 1538780 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCC 40088 | || || || | | || | ||| | | ||||| | || | || |||| Sbjct 1538779 CGAAGAAAGCAAGGATGTGAGAGACAAAGAACTGCTCATCAGCAGTTAGGCGGTTGTTCC 1538720 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | || ||| || || | ||| | || ||||| ||||| || || ||||| |||| Sbjct 1538719 AGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCT 1538660 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 1538659 TCTTGTACATTTGCCAAAT 1538641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908430786520