Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq40 109 5e-19 >seq40 Length=4096408 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||||||| | |||| | ||||| ||||| ||||| Sbjct 1050831 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAGCTGCTTACCA 1050890 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | |||||| || || |||||| | ||| Sbjct 1050891 GCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTC 1050950 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| ||| ||| || || || || || | || || || || || Sbjct 1050951 ACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTC 1051010 Query 27231 TTCACAAAGATTTGCATA 27248 ||||| || || |||||| Sbjct 1051011 TTCACGAAAATCTGCATA 1051028 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || ||||||||| | | || | || || Sbjct 1051047 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 1051106 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || || ||| | ||||| |||||||||||||| || | |||||| || || | Sbjct 1051107 AGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGG 1051166 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | |||| | || | || || | | || ||||| ||||| || | || Sbjct 1051167 ATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTT 1051226 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || |||||||||||| Sbjct 1051227 CCAGTAAGGGTCTTGACGAAGATTTGCATA 1051256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934177307816