Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13]
43 sequences; 45,458,781 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 9e-30
seq4 104 3e-17
>seq3
Length=2226179
Score = 145 bits (160), Expect = 9e-30
Identities = 352/522 (67%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||||||||| ||| | |||||||| |||||| | |||| ||||| | | ||| |
Sbjct 1538677 TGGACTGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTAACT 1538736
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
| |||| || || | ||||||| || ||||| |||| || ||||| ||
Sbjct 1538737 GCTGATGAGCAGTTCTTTGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATC 1538796
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| || | || || ||||| || |||| |||| || | |
Sbjct 1538797 GTCAACGAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCC-CTGAGGCTCGTTG 1538855
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| | | | ||| ||||| ||| ||||
Sbjct 1538856 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATTCATTCCGAGACCTACTCCCTCCTCA 1538914
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 94734
| |||| || || || || || || ||| | | ||||| | ||||| | ||
Sbjct 1538915 TCGACACATACATCAAAGAGCCCGCCCAGC-GAACCTATCTCTTCAACGCCATTGAGACC 1538973
Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 94793
|||| || || | |||||| || || ||||| || ||| | | | || | | |
Sbjct 1538974 ATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 1539033
Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853
| ||||||| |||| ||| | || ||||| |||||||||||||||||| |||| |
Sbjct 1539034 T-CCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGC 1539092
Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913
|||| | |||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 1539093 CTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAA 1539152
Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||| |||||||||||||| || || ||| || |||||
Sbjct 1539153 CGAGCTCATCTCTCGTGACGAAGGTCTTCACACTGACTTTGC 1539194
>seq4
Length=1305649
Score = 104 bits (114), Expect = 3e-17
Identities = 227/332 (68%), Gaps = 10/332 (3%)
Strand=Plus/Plus
Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 9752
||| | |||||||| || || ||||| || ||| || || ||| |||| || || |
Sbjct 1293586 TCCAATGGCATCAAGTTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCC-GC-A 1293643
Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812
| ||||| || || || |||||||| || ||||||||||| ||||| |||| | |
Sbjct 1293644 GTG--AAGAGGTCACGGACTCGCTTGGCACCGACACCAACAAAGATCTCGTCAAA-CTCG 1293700
Query 9813 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871
| | |||| | || ||||||||| || ||| || |||| ||||| || |||||
Sbjct 1293701 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 1293760
Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 9931
|||||||| || || || ||| | |||||| |||| || | || || |||
Sbjct 1293761 GTCTTACCAGTGCCAGGAGGACCGACTAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 1293820
Query 9932 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCG 9991
| | | | || || | ||| ||||| || |||| ||||| | || ||||||||
Sbjct 1293821 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 1293880
Query 9992 GCGTCAATCCCCTCAACATCGGTAAACCGGGT 10023
||||| || | ||||||| | ||||| ||
Sbjct 1293881 TCGTCACAACCATGAACATCGTTGAACCGAGT 1293912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260486497320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |