Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq39 176 6e-39 >seq39 Length=4506647 Score = 176 bits (194), Expect = 6e-39 Identities = 452/681 (66%), Gaps = 8/681 (1%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || || || ||||||| || ||||||||| | | | ||| || ||||| Sbjct 1598588 CCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATG 1598647 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| ||||| || |||| || ||||| |||| | || || || || Sbjct 1598648 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCG 1598707 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| ||||| || || || | | |||||| ||||| || || || || || Sbjct 1598708 TGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 1598767 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | | || ||||| || || || ||||| || | ||| | || ||||| || | Sbjct 1598768 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1598827 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || ||| || ||||| || || || || | || || ||| Sbjct 1598828 ACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1598887 Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || |||||| | | || | | || || || || |||||||| || || | | Sbjct 1598888 GTAGCACGAATACGGTGCACATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGG 1598945 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT-TAAGAAGA 78371 | || || | ||||||||||| ||||| |||||||| ||| |||| | | |||| Sbjct 1598946 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCCACCAAGA 1599005 Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431 | || | |||| ||| | ||| || || ||||| || | || || || |||||| Sbjct 1599006 AGCAAGAT-GACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1599064 Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTG 78490 || || | || ||| | ||||||||||| || | || || || || || Sbjct 1599065 GTGAAGAACTTGCTAGACATGAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCC 1599124 Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550 | || || || | |||||||| | ||| |||||||| | || || ||||| | Sbjct 1599125 CAG-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTC 1599183 Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610 || || | | ||||||| |||||||| || || ||||| || | |||| || || Sbjct 1599184 AATCTTAAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATC 1599243 Query 78611 TCTCTCGTAAATAATAACAGA 78631 | || |||| ||| |||| Sbjct 1599244 GCGGTCATAAACAATGGCAGA 1599264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668426615520