Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq394 194 2e-44 >seq394 Length=19953 Score = 194 bits (214), Expect = 2e-44 Identities = 506/769 (66%), Gaps = 52/769 (7%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | || | | ||| |||| ||||||| | |||| ||||||||| | Sbjct 8765 CATCTTCATTGCAATAGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 8706 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660 | | || ||| | ||| ||| ||| || || ||| |||||| |||| Sbjct 8705 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 8647 Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 | ||| | ||| |||| || || | |||||||||| ||||||||||||||| || Sbjct 8646 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 8588 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779 |||| |||||| ||| | || ||| | | | || ||| || | ||||| ||| Sbjct 8587 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 8528 Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839 ||||| | ||||||||| |||||||| || || || || |||||||| | || |||||| Sbjct 8527 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 8468 Query 145840 TACAGCTGGCAG-------------GAGA-----------GCTCCCCGCCC--------- 145866 || ||||||||| ||| |||| || || Sbjct 8467 TAGAGCTGGCAGTGCAGGTGGCCCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGA 8408 Query 145867 ------GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 | |||||||||||| | | |||||| || || ||| |||| ||| Sbjct 8407 GGGTAGGAGACGTAGAACTGGGCAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGA 8348 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTC 145979 || || ||||||||||||| || | || | | | || | ||||| | | || Sbjct 8347 TCGGCAGGGTTCCAGGCGGAAAGAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTT 8289 Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039 || | || ||||||||| ||||||| ||| ||| || ||||||| || || Sbjct 8288 GTGAATAATCTCGGCGAGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAAC 8229 Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||| | ||| ||||| ||||| ||||| || || || ||| ||| Sbjct 8228 GTACTCGGCGCCAAAGTGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTC 8169 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | ||| || ||| | ||||||| || ||||| || ||| ||||||||||||| Sbjct 8168 GCGGTGGTTGAGGCCGAGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTT 8109 Query 146160 GACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217 || ||| |||||| ||| ||| ||||| ||| ||| |||||||||||| ||| Sbjct 8108 GATGCCGGCCTCGCTGAG-GCT-GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGC 8051 Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || ||| ||| | | |||||| | ||||||||| || ||||||| Sbjct 8050 TCGGCGATGACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGGGA 8002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589965474635720