Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq889 82.4 5e-11 >seq889 Length=13703 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | || |||| |||||||||||| ||||| | ||| || ||| || ||| || Sbjct 5724 GTCATTCGCGACGGAATGGCGTGGGGGTTAATGATAATGTCCGGTGTCACACCCTCCCTG 5665 Query 71479 TCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGTGA 71536 ||||||||| |||||||| ||| | | || | || || ||||| || |||||| Sbjct 5664 CTGAAGGGCATATCCTCCTGACGGT-ACGTCA-CACCAATGGTACCCTTCTG-TCCGTGA 5608 Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACG 71595 || |||||||||||||| |||| || | ||| ||||||| | ||||||||| Sbjct 5607 CGAGAGGCAAACTTGTCGCCAATCTGGGGAATCTTGGTCGTCCTCACACGGACCTTGACG 5548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338702485591272