Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06]
15,093 sequences; 48,383,620 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1264 102 7e-17
seq2334 87.8 2e-12
>seq1264
Length=10365
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||||| ||| || ||||| || | ||| || ||||| | ||| | |||||
Sbjct 4006 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCG 4065
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| ||||||| | || || ||||| |||||||| ||||| ||||| |
Sbjct 4066 AGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGG 4125
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | || || | | | ||||| | || || |||| |||||||| |||
Sbjct 4126 ATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTCTTT 4185
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 4186 CCGGTGAGGGTCTTGACGAAGATCTGCAT 4214
>seq2334
Length=6172
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876
||||| || | ||| || ||||||| ||| | |||||| ||||| || || |||||
Sbjct 882 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 823
Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936
|| | || ||||| || || || || || || ||||| | || || | ||||||| |
Sbjct 822 ATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 763
Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996
||| ||||| | || || || | ||||| || || || || || || || |||
Sbjct 762 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACA 703
Query 94997 AAGATCTGCAT 95007
|||||||||||
Sbjct 702 AAGATCTGCAT 692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448206624261480
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |