Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq531 502 5e-137 seq951 387 3e-102 >seq531 Length=18082 Score = 502 bits (556), Expect = 5e-137 Identities = 1150/1718 (67%), Gaps = 45/1718 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| || |||| |||| || | ||||||||||||||| ||||| Sbjct 8220 ACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 8279 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| || | ||||||| || | ||| ||| || | Sbjct 8280 AGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGG------- 8332 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||||| || || ||||||||||||| ||| || | ||||| | || || Sbjct 8333 --GTCCTT---CATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCG 8387 Query 243917 GCGGCCATGGTGATGAGGTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 || ||||| ||| | | ||| ||| || ||||| | | |||||||||| || | Sbjct 8388 GCAGCCATC-TGA--ACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCC 8444 Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 |||| | |||||| ||||||||| | || || || | | | |||| || Sbjct 8445 TTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 8504 Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTC 244093 | |||| ||| ||||||||||| | | || ||| || ||| ||| Sbjct 8505 TTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTG 8564 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | || || ||||||||||||| |||| | || |||||| Sbjct 8565 ACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCG 8624 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| |||||||||| ||||||| || || ||||| ||||| || | | |||| Sbjct 8625 AAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGC 8684 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 |||||||| | | ||||||| || || | | ||| | | ||||||||| | | Sbjct 8685 AGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGG 8744 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 | || ||| | || | || ||||||||| ||||| || | |||| | || Sbjct 8745 TCAGA-AGG-CTTCACATT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCG 8795 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTC 244392 || ||||| | |||| | ||||||||| || || |||||||| || | || Sbjct 8796 GGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT- 8854 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 |||||| || | ||||||||||||||||||| |||||| | || || |||| | | Sbjct 8855 GAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGA 8914 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||| || |||| || | ||| | || || || ||||| || || | || || Sbjct 8915 CTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAAT 8974 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||||| ||||||| ||||| | ||||| | || ||||| ||| ||||||| Sbjct 8975 GGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGAT 9034 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | | |||| |||||||| || | | ||||||| || | ||| ||||| || Sbjct 9035 AATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA 9094 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | | ||| ||| | || ||| || || | ||||| | || || Sbjct 9095 ---GCAAGCATCATCGTAGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAG 9142 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 ||||||||| || ||||| || | | | ||||| || ||||||||||||||| || Sbjct 9143 GTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGA 9202 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || |||||||||||||| || || ||| |||| ||||||| |||||||||||| Sbjct 9203 GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAG 9262 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||||||||| ||||||||| ||| || |||||| | | |||||| | | || Sbjct 9263 CATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGC 9322 Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 ||| | ||| ||||| |||||||| | ||| || ||| || ||||||||||| Sbjct 9323 CTTCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTC 9382 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGC 244991 ||| || ||| | || ||||||||| || ||| |||||||| |||| || | Sbjct 9383 CTCGCCATAGCAGTCGGCCAGACCGGGGCAC-TCGTTGGGACACATGAGGGTCCAGTCAC 9441 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | || ||||||||| ||||| |||||||| ||| |||| ||||| | Sbjct 9442 CGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGC 9501 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 || | ||| ||| ||| |||||| | ||| || | || |||||||| || Sbjct 9502 GGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTG 9561 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||||||||| | ||||| || | ||| || || ||||||||||| |||||||| | Sbjct 9562 CGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGA 9621 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | || | || | |||||||| || || | || | ||||| ||| ||| Sbjct 9622 CGTACCGGGC-AGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCG 9680 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290 ||||| || |||||| | ||| || | | || | || | || ||| | || Sbjct 9681 TTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCA 9740 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 || || ||||||||| | ||| ||| |||||| || || || ||||| |||||| Sbjct 9741 CCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTG 9800 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410 ||| ||||||| || ||| ||||| ||||||||||| |||| ||| | | | ||| Sbjct 9801 TCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTG 9860 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGA 245448 || || |||||| ||| ||||| ||| | |||||| Sbjct 9861 AAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGA 9898 >seq951 Length=13420 Score = 387 bits (428), Expect = 3e-102 Identities = 612/860 (71%), Gaps = 28/860 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||||||||| | Sbjct 5811 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATTTA 5870 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414 ||||||| || |||| | || ||| ||| |||| |||| ||| || Sbjct 5871 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 5928 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| || ||||||||||| ||||| |||||||| | | Sbjct 5929 CCCACATCCTCGCCTTCTTCGCTGCATCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 5988 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||| || |||||||||||||||||||| | Sbjct 5989 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 6048 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| | Sbjct 6049 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 6105 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | | | || | | || ||||| ||||| ||||| || ||||||||| ||||||| Sbjct 6106 CTGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 6165 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710 | |||||||| || |||||| || | | | || | | || | || | || || Sbjct 6166 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 6224 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || ||| | ||||||||||| ||||||||| || ||||| |||||||||||||||||| Sbjct 6225 GCTTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 6284 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || || || ||||| || || ||||| || ||||| |||||| | ||||| Sbjct 6285 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 6343 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888 ||| || || | |||||||| |||||||| ||| ||||||| ||| | ||| Sbjct 6344 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 6400 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 | ||| || ||| || ||||||||| || ||||| || ||| |||||||||| | Sbjct 6401 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 6459 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 | || | || ||| ||||| ||||||||||| |||||||||| |||||||| Sbjct 6460 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 6519 Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065 ||| ||||||||||| ||||| || ||| | || | || | ||||||| | Sbjct 6520 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 6576 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | |||||||||||| |||||||||||||| | | |||||||||||||| ||||||| Sbjct 6577 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 6636 Query 43126 AGCGCGTCGCCGACTACCAG 43145 |||| |||| ||||||||| Sbjct 6637 AGCGTGTCGGTGACTACCAG 6656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944161038605680