Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq531 325 4e-84 >seq531 Length=18082 Score = 325 bits (360), Expect = 4e-84 Identities = 1086/1674 (65%), Gaps = 48/1674 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||| | |||||| ||||| ||| || |||||||||||||| ||||||| | Sbjct 10051 TACCAGTACTTCGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 9992 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| || || || || | ||||| || | |||| || || |||| Sbjct 9991 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGAT 9932 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| || | | | || ||| | ||| | ||| ||| || Sbjct 9931 ATTGAGCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCC 9872 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || ||||| ||||| || || || || ||| ||| |||| || || |||||| | ||| Sbjct 9871 CCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGAC 9812 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | || | ||| ||| || |||| || | |||||| |||||| | ||||| Sbjct 9811 -ATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTC 9753 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || ||||| || ||||| | | |||||| | ||||||| || || ||||| Sbjct 9752 CAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACAT 9693 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 | |||||||| || ||||||||||| || ||| ||||| || |||||||||||| | Sbjct 9692 CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACAC 9633 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || ||||| ||||||||||| | | | ||| | || || |||| || || Sbjct 9632 TGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGA 9573 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 |||||||||||| || || | ||| | |||||||| |||||||||||||| || Sbjct 9572 GCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGA 9513 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || | ||| | ||||| ||| ||||||||| | || || || || ||||| || || Sbjct 9512 GGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 9453 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 |||||| ||| | ||||| || | |||||||| || || ||||| ||| ||||| Sbjct 9452 CGAGAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTG 9393 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCA---------GGGCAA 94427 | ||| || || || | |||| ||||||| | | |||||| Sbjct 9392 CTATGG---------CGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAA 9342 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| ||| | || |||||| ||| || ||| | || | ||| || Sbjct 9341 GGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGA 9282 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||| || | |||| ||| | | |||||| | ||| |||| |||| ||||||| || Sbjct 9281 GACCGGCAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGA 9223 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || ||| ||||| ||||| |||||||||||| ||||||| | || | Sbjct 9222 ACCTGGGCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTG 9163 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||| ||||||| || ||||| | || | |||| | ||||| | || | Sbjct 9162 ATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTG----CCTTCGTTC---AT--CA 9112 Query 94667 AC-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--G 94723 || ||| | ||||| | || | || || | || || | ||| || | Sbjct 9111 ACTACG-ATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCAC--ACAGGTTGTCG 9055 Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 | |||||||||||| | |||||| |||| |||||| || |||| || ||| Sbjct 9054 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 8995 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 ||| || || || ||||| || | || ||||||||| | || || || | | Sbjct 8994 GCAACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTG 8935 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903 |||| |||| | ||| ||| ||| || | | || | | || ||||| | Sbjct 8934 CTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGA 8875 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || | | ||| | | || || || |||||| ||| | || || Sbjct 8874 CCATCTACCATGCTGCCCTCACTGCTTCGGTGCAGCTGGCCA---AGGAGGAGGGTCCCT 8818 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 || | ||| || || ||| |||| ||| | ||||||||| | ||| || Sbjct 8817 ACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATG 8758 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTG 95083 ||||||| || | || | |||||||| || || | | || | | ||||| Sbjct 8757 TGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCA 8698 Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 | ||| ||||| | ||||| ||||| || ||| || |||||||||| |||| Sbjct 8697 TTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCA 8638 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 ||||||||| ||||| || | |||||||||| | ||| | | || || ||||| || | Sbjct 8637 ACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCG 8578 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGG--TGT-GTGG 95259 | |||| ||| ||||| || || ||||| || | | |||| ||| || | Sbjct 8577 AGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGAC-ATGGGCCTGTGGTCG 8519 Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319 | || || | || |||| | | | || ||||| ||| ||||||||||||| | Sbjct 8518 GATGCCA---TGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAAC 8462 Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || | || ||||||| |||||||||||||| |||||||| |||||||| Sbjct 8461 ATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGC 8408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494629864284280