Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq531 455 6e-123 seq951 206 5e-48 >seq531 Length=18082 Score = 455 bits (504), Expect = 6e-123 Identities = 1250/1884 (66%), Gaps = 92/1884 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||| ||||||| || || || ||||||||||| ||||| Sbjct 8220 ACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 8279 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 8280 AGGCCGAGCTT---CCAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 8329 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | ||| |||||||| ||| || ||||| | | Sbjct 8330 GGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACC 8380 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | || | | ||| || | |||||| ||||||||| ||| Sbjct 8381 TCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAG 8440 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA- 212847 | |||| || | |||| | |||||||||||| | || || || | | | || Sbjct 8441 GGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAA 8496 Query 212848 -GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904 | | | | |||| | || ||| |||||| || | ||| ||||| ||| Sbjct 8497 TGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCC 8556 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 |||||||| | |||||| || || | ||| || | | |||||| | ||| || |||| Sbjct 8557 AGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGT 8616 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 | ||||||| || ||||||||| ||||| ||||| | ||| ||||| || ||||| || | Sbjct 8617 AAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGG 8676 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084 | | ||| |||||||| | | |||||||| || | ||| || | |||||| Sbjct 8677 CAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGT 8736 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | |||| ||| |||||| ||||||||||| ||||| | || || Sbjct 8737 CCCAGAGGTCAGA-AGG--------CTTCACATTCCACATGTCGAACTGGAGAATACC-- 8785 Query 213145 TGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||| |||| ||||| | | | ||||||||| || | |||||||||||||| | Sbjct 8786 --CTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-G 8842 Query 213201 CA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 || || || |||||||| | ||||||||| || || |||| | ||||||||| Sbjct 8843 CACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACG 8902 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| ||| ||||| || |||| ||||||| || |||||||| Sbjct 8903 AGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGAC 8962 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 || | || ||||||| ||||| || ||| ||| |||| ||| | ||||| Sbjct 8963 ACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGT 9021 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 ||| |||||| ||| |||| |||||||| | | || | ||||| | | || Sbjct 9022 GGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA--- 9078 Query 213439 ACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGC 213492 ||| || ||| | |||| | ||| | | ||| ||||||||| | Sbjct 9079 ACTTCTG---GAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAG 9135 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 || |||||||| || || ||||| | || | | |||||| || ||||||||||| | Sbjct 9136 AAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGA 9195 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCC 213611 | ||| || ||||||||||||||||||| ||| ||| ||||| | |||| ||| Sbjct 9196 GATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCC 9254 Query 213612 TTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGA 213669 |||||||||||| ||||| |||||||| ||| | | | || | |||| ||||| Sbjct 9255 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGA 9312 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGA 213729 | | | |||||| || | || | | | || ||| |||| |||||| | Sbjct 9313 GCTTCTGGGCCTT---CATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAA 9369 Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789 | | | ||| || | ||| || | |||| || || || ||||||||||| Sbjct 9370 GAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGA 9429 Query 213790 GGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 || ||||||| ||| || |||| ||| | || |||||| || || || | ||| || || Sbjct 9430 GGGTCCAGTCACCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCC 9488 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||||||||| | || | ||| ||| || ||| |||||||| || || || Sbjct 9489 AGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAC 9548 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 ||||||| || |||||||| ||||| | ||||||||||||||| || | || | ||| Sbjct 9549 TCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTG 9608 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || || ||| ||||||||| || || | ||| | ||| Sbjct 9609 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCG 9668 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATG 214082 ||||| |||||||| || || || || ||||| | ||| | | ||| | | | Sbjct 9669 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACG 9725 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 || || || ||||| || ||||||||||||||| ||| | | | ||| || Sbjct 9726 TTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 9785 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 || || | |||||||| ||| | | || | || |||||| || ||||| ||| | Sbjct 9786 ATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGG 9845 Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262 | | |||| ||||| || |||||| ||||||| | | || ||| | || | || Sbjct 9846 GGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGG 9905 Query 214263 CTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCAT 214321 |||||||||||||||| || |||| ||| | || | || | ||| Sbjct 9906 TTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCAT 9964 Query 214322 CAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCG 214378 | |||||||||||| | ||| | || ||| | |||||| |||||||| || Sbjct 9965 GATCATGTGCTGGGGACGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCG 10021 Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402 ||| ||||||||||| || ||||| Sbjct 10022 CTCAAGAGTCTTGAAGCCGAAGTA 10045 >seq951 Length=13420 Score = 206 bits (228), Expect = 5e-48 Identities = 487/729 (67%), Gaps = 11/729 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 6656 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 6597 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 6596 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 6538 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| | ||||||||| | |||| Sbjct 6537 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 6478 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | |||| || || ||||||| ||| || ||||| || | || | Sbjct 6477 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 6418 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || | | || || || | || | | | | || | ||| | ||| |||| Sbjct 6417 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 6361 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||| | || ||||| || ||||||| ||||||| ||| || ||||||| Sbjct 6360 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 6301 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || ||||||||||| || | || || | || ||||||||| |||| Sbjct 6300 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 6241 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || || || ||| ||| | || | || || | ||||||||| |||||| Sbjct 6240 CGACGGCAGCAAAAGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 6181 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 | |||||||| |||||||| |||||| || || ||||| ||||| |||||| | Sbjct 6180 GGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT 6121 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | | | | | ||| | ||||| | |||| ||| | ||| |||| | Sbjct 6120 AGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 6064 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || ||||||||| ||||||||| | |||||| | ||| | Sbjct 6063 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 6004 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||||| ||| | || ||||| ||||| || || || || ||||| |||| Sbjct 6003 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGCGAAGA 5944 Query 48555 AGGCAAGGA 48563 |||| |||| Sbjct 5943 AGGCGAGGA 5935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931357054693120