Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1264 93.3 4e-14 >seq1264 Length=10365 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||| | || || || |||||||| || |||| | Sbjct 4021 GACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCA 4080 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||||||||| ||||| |||||||| || || || || ||||| Sbjct 4081 AAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATTTCACA 4140 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| || ||||| || | || | || || || || || || || Sbjct 4141 TTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTG 4200 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 4201 ACGAAGATCTGCAT 4214 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| || || |||||||||||| || ||| || ||||| Sbjct 3777 AACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTC 3836 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| ||||| | | |||| || ||||| || || || || ||||| || || || Sbjct 3837 CAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 3896 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || |||| | || | |||||| ||| |||||| || | || | || || Sbjct 3897 AATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGTGATGGTCTT 3956 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || | || |||||||| Sbjct 3957 TCCAGTGAGAGTCTTGACAAAGATCTGCAT 3986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476521281339480