Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq394 125 8e-24 >seq394 Length=19953 Score = 125 bits (138), Expect = 8e-24 Identities = 476/747 (64%), Gaps = 50/747 (7%) Strand=Plus/Minus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCAC 146861 ||| |||| ||||||| || ||||||| || ||| | | |||| ||| | ||| | Sbjct 8744 GTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATG-CTTCCGC 8686 Query 146862 CCGCCTCAA----AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTT 146917 || ||| ||||| |||| || ||| ||||| | | | ||||| | | Sbjct 8685 CCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGT 8626 Query 146918 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCC 146977 | || | |||||||||| ||||||||||||||| || |||| | ||| | | | Sbjct 8625 TGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCTGC 8566 Query 146978 CCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGT 147037 | ||| | || ||||| |||| ||||| || ||||| | ||||||||| |||| Sbjct 8565 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 8506 Query 147038 TGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT--C 147095 |||| ||||| || || |||||||| | || | |||||| |||||||| || | | Sbjct 8505 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGCAGGTGGC 8446 Query 147096 CC-------------------CGTCGGCC------------------ACGTAAAACTGGC 147118 || ||||| || ||||| |||||| Sbjct 8445 CCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGAGGGTAGGAGACGTAGAACTGGG 8386 Query 147119 ACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGA 147178 | |||||||| || || || |||| ||| || || ||||||||||| || | Sbjct 8385 CAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGATCGGCAGGGTTCCAGGCGGAAA 8326 Query 147179 CCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGG 147237 | ||| || | | || | ||||| | | || | |||| | |||||| Sbjct 8325 GAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTTGTGAATAATCTCGGCGAGCTGG 8267 Query 147238 TCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTC 147297 || ||||||| |||| ||||| ||| | || |||||| ||| |||||||| | | Sbjct 8266 TCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAGTGTCGC 8207 Query 147298 CACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC 147357 || |||||||||||||| || || || |||||| || | ||| || ||| Sbjct 8206 CATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCGAGGTTG 8147 Query 147358 TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGGCGGAGAGCT 147415 | ||| |||||| |||| || | | |||||||||| | || | | || ||| ||| Sbjct 8146 TCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCT 8088 Query 147416 CCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAA 147475 | ||| ||| |||| |||||||||||| ||||| | | || | | | Sbjct 8087 -GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGA 8029 Query 147476 AGACCCTCTTGGTGGTCAGCAGGGGGA 147502 |||| | ||||||||| || ||||||| Sbjct 8028 AGACGCGCTTGGTGGTGAGGAGGGGGA 8002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583377917695200