Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq531 215 6e-51 >seq531 Length=18082 Score = 215 bits (238), Expect = 6e-51 Identities = 1115/1753 (64%), Gaps = 43/1753 (2%) Strand=Plus/Plus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 |||| | ||| || |||||||| || ||||| || || | ||||| || | ||| Sbjct 8247 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 8306 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || | || |||| ||| || || | |||| || ||| | ||| |||| Sbjct 8307 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT-- 8364 Query 110472 GGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCC 110531 | ||||||||| || || | || ||||| | || ||| | | | ||| |||| Sbjct 8365 GATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCC 8424 Query 110532 AAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAAC 110591 | || || ||||| ||||| || | ||||| | | ||| ||||||||||||| Sbjct 8425 AGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAAC 8484 Query 110592 CCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651 | | | | || | | ||||| | | ||||| || || || | |||| Sbjct 8485 CGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGT 8544 Query 110652 CATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGA 110711 | |||| || |||||| | ||||| || |||||| | | | |||||| Sbjct 8545 CCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGA 8604 Query 110712 TGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTG 110771 |||| | ||||| || || ||||| || || || |||| ||| || | || ||| | Sbjct 8605 TGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAG 8664 Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831 | ||||| || || | || |||||||| |||| || | |||||||| | ||| || Sbjct 8665 TAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGA 8724 Query 110832 GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC 110889 | |||||||| || | || || ||||| |||| ||||||| ||||| || | Sbjct 8725 GGTTCTCCCAGTCCCAGAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAAT 8782 Query 110890 CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT- 110948 || | || |||||||| |||| ||||| |||| ||| | | | |||| | Sbjct 8783 ACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTG 8842 Query 110949 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 111008 ||| | || |||| || || || ||||| || ||||| | || | ||| Sbjct 8843 CACCGAA-GCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCAC 8901 Query 111009 TGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTG 111066 || || || || ||| || | ||| || | || || |||| || ||||| || Sbjct 8902 GAGCCTCGGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTG 8959 Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126 ||||| | |||||| |||| ||||||||| || || || || | ||| || || Sbjct 8960 GACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTA 9019 Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186 || ||| || | | ||| || || |||| || ||||| || || | Sbjct 9020 GTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAA 9079 Query 111187 TTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGA 111243 || | | ||| | || || || || | ||| || || ||||| | || Sbjct 9080 CTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGA 9136 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 || | ||||| ||||| |||||| | |||||| | ||| || || || | Sbjct 9137 AGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAG 9196 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||||| || || || |||| ||||| ||||| ||||| |||||| ||||| Sbjct 9197 ATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTT 9256 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 |||||||||| |||| | || ||||| ||||| | | ||| || || | ||| | | | Sbjct 9257 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTT 9316 Query 111423 CGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 | | | || |||| ||| | || | ||| || ||| |||||| ||| || | Sbjct 9317 CTGGGCCT----TCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAG 9372 Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 | || |||||||| ||| || ||||| ||||| || || || ||||| | || Sbjct 9373 CCTCGAACTCCTC-GCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGG 9431 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| | ||| | ||| || ||||||||||| || || |||||||| || | Sbjct 9432 GTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGG 9491 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 || || || | || |||| || | || ||||| || | ||||||||||| Sbjct 9492 AACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCA 9551 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGC 111712 | || ||| |||||||| |||||||| |||| || | || || ||| | | Sbjct 9552 AAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG- 9608 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || || || ||| ||| || || |||||||| || | | ||| Sbjct 9609 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCG 9668 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832 | || ||| || || || || ||| | |||| | | |||| || | Sbjct 9669 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTC 9728 Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892 | || ||||| || ||| ||| ||||| ||||| | | ||||| |||| ||| Sbjct 9729 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 9788 Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952 || | || |||||| || || ||| |||||||| ||||| ||| || || Sbjct 9789 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 9848 Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGT 112010 |||||||||||||||||||| || | || || |||| | | || |||||| || Sbjct 9849 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 9906 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| ||||||| |||| ||||| || || || |||||||| | || ||||||| Sbjct 9907 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 9966 Query 112071 ACATGTACTGTGG 112083 ||||| ||| || Sbjct 9967 TCATGTGCTGGGG 9979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627913513912800