Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq531 185 1e-41 seq951 132 6e-26 >seq531 Length=18082 Score = 185 bits (204), Expect = 1e-41 Identities = 1118/1776 (63%), Gaps = 43/1776 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| ||||| || |||| | ||| ||||||||||| |||||||| || | Sbjct 8224 TGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGC 8283 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||||| | | ||||| || | |||| | ||| || | |||| Sbjct 8284 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGT 8343 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || ||| | ||||| ||||| |||||| || || || || ||||| | || | Sbjct 8344 GGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGA 8403 Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044 | | | | || ||||| || ||| |||||||| ||| | || | ||||| | Sbjct 8404 CCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGT 8463 Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTG 118101 ||| || |||||||| ||| || | | |||| | | ||||| | | | Sbjct 8464 TGGGGATGTTCTGGATGGA---ACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCG 8520 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161 |||| || || || | || |||| | || ||||| || ||||| | Sbjct 8521 ACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGC 8580 Query 118162 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 118221 | |||||| || | | | ||||| |||| ||||| ||||| |||||||| ||||| | Sbjct 8581 CAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGC 8640 Query 118222 CCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 118281 ||| ||| || | || ||| || ||||| || || | || || ||||| || | | Sbjct 8641 CCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGC 8700 Query 118282 CCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341 | | ||| | | | ||| ||| |||||||| || | | || | | | Sbjct 8701 CGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACAT 8760 Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401 |||||| || |||||||| ||||| | || || || || |||| || || || | Sbjct 8761 TCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGG 8820 Query 118402 GGCCCTCAACCTCCGCCAATTCGGAGCTC-GCCTCGAGGGCTGCGTGATACATTGTTTCA 118460 | ||||| ||| |||| | | | | || |||||| || || || || || || Sbjct 8821 GACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCG 8879 Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AAT 118519 || || | || | | |||||| || || || | | || || | || Sbjct 8880 AAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCG-CAGAGCAAG 8938 Query 118520 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 118579 || |||| || ||||| |||||||| | ||||| || || |||| ||| || || Sbjct 8939 GAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTT 8998 Query 118580 CCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 118639 ||||| | || || || ||| ||||||| ||| || || || ||| Sbjct 8999 GCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGAC 9058 Query 118640 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGAC 118696 ||||| ||||| || || | ||| | | | ||| | || || || || | ||| Sbjct 9059 AACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGAT 9115 Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756 || ||| ||||| | || || || || || |||| |||||| | ||| Sbjct 9116 GAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTA 9175 Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816 ||| ||||| || ||||| | || || || |||||||||| |||||| || || Sbjct 9176 CTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCT 9235 Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876 ||| ||| || |||||||| |||||| | || | || ||||| || || | || Sbjct 9236 CTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTC 9295 Query 118877 GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG----CTCGCCCCTCT 118931 ||| || || | ||||| | || | || || ||| ||| || |||| || Sbjct 9296 GAGGATGGCATACCAGAGCTTCTGGGCCTT---CA-TGGTCTTGCGACCCTTGCCCGCCT 9351 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 || || |||||| ||| || || || ||||| || || | || | || || || Sbjct 9352 TC-TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGG 9410 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051 || | || || | ||| | ||| | ||| || ||| || |||||||||||||| Sbjct 9411 CACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGA 9470 Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111 || || |||||||| ||| ||| || || || ||| | || || | || || || Sbjct 9471 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 9530 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 |||| || | || || | || ||| |||||||| || || ||||| | || | Sbjct 9531 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 9590 Query 119172 GACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225 | || | | || ||| |||||| || |||| |||||| ||| || ||| Sbjct 9591 GCACC---AGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 9647 Query 119226 CGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTAT 119283 |||||||| || ||| ||| | ||| || || || || ||| || ||| | | Sbjct 9648 CGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCC--AG 9705 Query 119284 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 119343 |||| | || ||||| || || || ||||| || ||| ||| ||||| || | Sbjct 9706 TGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCAC 9765 Query 119344 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 119403 | | ||||| | | || || || || || ||| | || | ||| ||||||| Sbjct 9766 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGC 9825 Query 119404 AGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGA 119463 | |||| |||||| ||| |||||||| |||||||| || || | || ||| ||| Sbjct 9826 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 9885 Query 119464 ACA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521 | | | || |||||| || ||||||||||| ||| ||| || || || Sbjct 9886 AGAATTTGCT--CGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCA 9943 Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 || |||| || || ||||| | ||||| ||||| Sbjct 9944 GATGCCGACAGACACACGCATGATCATGTGCTGGGG 9979 >seq951 Length=13420 Score = 132 bits (146), Expect = 6e-26 Identities = 527/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 6652 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 6593 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | | | | |||||| || Sbjct 6592 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGAC-GAGGAGGCG 6534 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| ||| |||| |||||| |||| ||| || Sbjct 6533 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCA 6474 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||||||| || || || | |||| | || Sbjct 6473 GGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTG 6414 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| || | ||| || | | ||| | | | || ||| || | |||| || Sbjct 6413 GATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CAAAGTC 6357 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || || ||| ||| || |||||||| Sbjct 6356 GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAG 6297 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | |||||| || | ||| | || ||||||||| ||||| || Sbjct 6296 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGAC 6237 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202 || || || | |||||||| ||||||||| || | |||| | | ||| | Sbjct 6236 GGCAGCAAAAGCGACGAGACGCTGAGCAAAGGA-CGAGTTCTTGTCCTGGATCCATCGGA 6178 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 | ||||| | ||||| || ||| || |||| ||||| || || | ||||| | Sbjct 6177 TGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 6118 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | || | || || |||||||| | || ||||| || || || ||| |||| Sbjct 6117 TTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGA 6058 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 6057 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTC- 6000 Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 | || ||| | | || | ||||| || || || || || |||| || || Sbjct 5999 GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGCGAAGAAG 5942 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495 || ||||| | | ||| ||| || | | ||| || | |||||||||| Sbjct 5941 GCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGG 5882 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || | ||| | |||||| |||||||| Sbjct 5881 AGATCCTTGGATAAATCAATCTCCTCGGCAGTCCA 5847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618318524469080