Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06]
15,093 sequences; 48,383,620 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq531 185 1e-41
seq951 132 6e-26
>seq531
Length=18082
Score = 185 bits (204), Expect = 1e-41
Identities = 1118/1776 (63%), Gaps = 43/1776 (2%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||| ||||| || |||| | ||| ||||||||||| |||||||| || |
Sbjct 8224 TGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGC 8283
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| | | ||||| || | |||| | ||| || | ||||
Sbjct 8284 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGT 8343
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| ||| | ||||| ||||| |||||| || || || || ||||| | || |
Sbjct 8344 GGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGA 8403
Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044
| | | | || ||||| || ||| |||||||| ||| | || | ||||| |
Sbjct 8404 CCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGT 8463
Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTG 118101
||| || |||||||| ||| || | | |||| | | ||||| | | |
Sbjct 8464 TGGGGATGTTCTGGATGGA---ACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCG 8520
Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161
|||| || || || | || |||| | || ||||| || ||||| |
Sbjct 8521 ACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGC 8580
Query 118162 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 118221
| |||||| || | | | ||||| |||| ||||| ||||| |||||||| ||||| |
Sbjct 8581 CAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGC 8640
Query 118222 CCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 118281
||| ||| || | || ||| || ||||| || || | || || ||||| || | |
Sbjct 8641 CCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGC 8700
Query 118282 CCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341
| | ||| | | | ||| ||| |||||||| || | | || | | |
Sbjct 8701 CGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACAT 8760
Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401
|||||| || |||||||| ||||| | || || || || |||| || || || |
Sbjct 8761 TCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGG 8820
Query 118402 GGCCCTCAACCTCCGCCAATTCGGAGCTC-GCCTCGAGGGCTGCGTGATACATTGTTTCA 118460
| ||||| ||| |||| | | | | || |||||| || || || || || ||
Sbjct 8821 GACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCG 8879
Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AAT 118519
|| || | || | | |||||| || || || | | || || | ||
Sbjct 8880 AAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCG-CAGAGCAAG 8938
Query 118520 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 118579
|| |||| || ||||| |||||||| | ||||| || || |||| ||| || ||
Sbjct 8939 GAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTT 8998
Query 118580 CCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 118639
||||| | || || || ||| ||||||| ||| || || || |||
Sbjct 8999 GCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGAC 9058
Query 118640 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGAC 118696
||||| ||||| || || | ||| | | | ||| | || || || || | |||
Sbjct 9059 AACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGAT 9115
Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756
|| ||| ||||| | || || || || || |||| |||||| | |||
Sbjct 9116 GAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTA 9175
Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816
||| ||||| || ||||| | || || || |||||||||| |||||| || ||
Sbjct 9176 CTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCT 9235
Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876
||| ||| || |||||||| |||||| | || | || ||||| || || | ||
Sbjct 9236 CTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTC 9295
Query 118877 GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG----CTCGCCCCTCT 118931
||| || || | ||||| | || | || || ||| ||| || |||| ||
Sbjct 9296 GAGGATGGCATACCAGAGCTTCTGGGCCTT---CA-TGGTCTTGCGACCCTTGCCCGCCT 9351
Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991
|| || |||||| ||| || || || ||||| || || | || | || || ||
Sbjct 9352 TC-TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGG 9410
Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051
|| | || || | ||| | ||| | ||| || ||| || ||||||||||||||
Sbjct 9411 CACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGA 9470
Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111
|| || |||||||| ||| ||| || || || ||| | || || | || || ||
Sbjct 9471 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 9530
Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171
|||| || | || || | || ||| |||||||| || || ||||| | || |
Sbjct 9531 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 9590
Query 119172 GACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225
| || | | || ||| |||||| || |||| |||||| ||| || |||
Sbjct 9591 GCACC---AGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 9647
Query 119226 CGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTAT 119283
|||||||| || ||| ||| | ||| || || || || ||| || ||| | |
Sbjct 9648 CGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCC--AG 9705
Query 119284 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 119343
|||| | || ||||| || || || ||||| || ||| ||| ||||| || |
Sbjct 9706 TGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCAC 9765
Query 119344 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 119403
| | ||||| | | || || || || || ||| | || | ||| |||||||
Sbjct 9766 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGC 9825
Query 119404 AGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGA 119463
| |||| |||||| ||| |||||||| |||||||| || || | || ||| |||
Sbjct 9826 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 9885
Query 119464 ACA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521
| | | || |||||| || ||||||||||| ||| ||| || || ||
Sbjct 9886 AGAATTTGCT--CGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCA 9943
Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557
|| |||| || || ||||| | ||||| |||||
Sbjct 9944 GATGCCGACAGACACACGCATGATCATGTGCTGGGG 9979
>seq951
Length=13420
Score = 132 bits (146), Expect = 6e-26
Identities = 527/815 (65%), Gaps = 21/815 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 6652 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 6593
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | || | | | || | | | | |||||| ||
Sbjct 6592 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGAC-GAGGAGGCG 6534
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | |||| |||| ||||||| ||| |||| |||||| |||| ||| ||
Sbjct 6533 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCA 6474
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
||||| || || | |||| ||| ||||||| || || || | |||| | ||
Sbjct 6473 GGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTG 6414
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
||| || | ||| || | | ||| | | | || ||| || | |||| ||
Sbjct 6413 GATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CAAAGTC 6357
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| |||||||||||||| |||||||| || || || ||| ||| || ||||||||
Sbjct 6356 GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAG 6297
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
|| |||||||| | |||||| || | ||| | || ||||||||| ||||| ||
Sbjct 6296 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGAC 6237
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202
|| || || | |||||||| ||||||||| || | |||| | | ||| |
Sbjct 6236 GGCAGCAAAAGCGACGAGACGCTGAGCAAAGGA-CGAGTTCTTGTCCTGGATCCATCGGA 6178
Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262
| ||||| | ||||| || ||| || |||| ||||| || || | ||||| |
Sbjct 6177 TGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 6118
Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322
| || | || || |||||||| | || ||||| || || || ||| ||||
Sbjct 6117 TTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGA 6058
Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381
| | ||| || | ||| | ||||||| | || || ||| ||||| |||||
Sbjct 6057 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTC- 6000
Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438
| || ||| | | || | ||||| || || || || || |||| || ||
Sbjct 5999 GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGATGCAGCGAAGAAG 5942
Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495
|| ||||| | | ||| ||| || | | ||| || | ||||||||||
Sbjct 5941 GCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGG 5882
Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||||| || | ||| | |||||| ||||||||
Sbjct 5881 AGATCCTTGGATAAATCAATCTCCTCGGCAGTCCA 5847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618318524469080
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