Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06]
15,093 sequences; 48,383,620 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq394 113 4e-20
>seq394
Length=19953
Score = 113 bits (124), Expect = 4e-20
Identities = 201/289 (70%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818
|||||||| || |||| | |||||||| ||||| | |||| | ||| ||| ||
Sbjct 8743 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 8685
Query 29819 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874
|| || | | ||| ||| |||||| | |||||| | ||| ||||| || ||
Sbjct 8684 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 8625
Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCC 29934
|| | ||||||| || ||||||||||| || || |||| | ||| | | || |
Sbjct 8624 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTGC 8566
Query 29935 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993
| || | | || |||||| |||||||||| || || || | ||||||||| ||||
Sbjct 8565 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 8506
Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
| || || || ||||| |||||||| | || | |||||||||||| ||
Sbjct 8505 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 8457
Score = 91.5 bits (100), Expect = 1e-13
Identities = 187/272 (69%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247
||||| || || ||| | |||| |||||| | | | || |||||| || || ||
Sbjct 8272 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAG 8213
Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307
|| | ||| ||||| |||||||| || || || || || | || | ||| | || |||
Sbjct 8212 TGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCG 8153
Query 30308 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCAG 30365
||||| | || || | ||| || ||| ||||||||||||| | || | || | |
Sbjct 8152 AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTG 8093
Query 30366 AGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30424
|| ||| ||||| |||| ||||| || |||||| || ||||| | | ||||||
Sbjct 8092 AG-GCT-GGTGGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCG 8036
Query 30425 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
||||| | |||||| |||||||||||
Sbjct 8035 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 8004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406235660852556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |